RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ZNF77Q15935 545 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PRR4Q16378 134 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 SSX2Q16385 188 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 AANATQ16613 207 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 DUSP7Q16829 419 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 IMMTQ16891 758 aaKnown RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 KLHL38Q2WGJ6 581 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 BCL7AQ4VC05 210 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 ARMC12Q5T9G4 340 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PRAMEF20Q5VT98 475 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 CCDC137Q6PK04 289 aaKnown RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 PAMR1Q6UXH9 720 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 GSG1LQ6UXU4 331 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PGAP1Q75T13 922 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 NANOGNBQ7Z5D8 188 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 TTC5Q8N0Z6 440 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 BBS5Q8N3I7 341 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 KCNG3Q8TAE7 436 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 TYMSOSQ8TAI1 123 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 ZPLD1Q8TCW7 415 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 DNAJA4Q8WW22 397 aaPredicted RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 TM4SF19Q96DZ7 209 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 OXGR1Q96P68 337 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 OR5M11Q96RB7 305 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PANX2Q96RD6 677 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PLIN2Q99541 437 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PAXXQ9BUH6 204 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 NUP58Q9BVL2 599 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 C19orf24Q9BVV8 132 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 SRXN1Q9BYN0 137 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 RAB34Q9BZG1 259 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PKIBQ9C010 78 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PNNQ9H307 717 aaKnown RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 NARFLQ9H6Q4 476 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 NHEJ1Q9H9Q4 299 aaPredicted RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 NMRAL1Q9HBL8 299 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PEX16Q9Y5Y5 336 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 NPTNQ9Y639 398 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 IGKV1D-8A0A087WSZ0 117 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 A0A0G2JRQ6 117 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 SMIM28A0A1B0GU29 152 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 TCRBV9S1A1TA0A576 114 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 E7ESA3 106 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 K7N7A8 449 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 DCTN6O00399 190 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 STAMBPO95630 424 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 TMEM50AO95807 157 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 LALBAP00709 142 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 CCDC130P13994 396 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 AQP1P29972 269 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 DDOSTP39656 456 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 CRYBB2P43320 205 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 ATP5OP48047 213 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 RPL34P49207 117 aaKnown RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 PLP1P60201 277 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 TGM3Q08188 693 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 BST2Q10589 180 aaKnown RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 PLD1Q13393 1074 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 HIGD2BQ4VC39 106 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 OR2B11Q5JQS5 317 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 KLF17Q5JT82 389 aaPredicted RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 METTL11BQ5VVY1 283 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 LRRC66Q68CR7 880 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 RNASEKQ6P5S7 137 aaKnown RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 GTSCR1Q86UQ5 136 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 PAQR7Q86WK9 346 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 ZNF677Q86XU0 584 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 HPS6Q86YV9 775 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 PSTKQ8IV42 348 aaKnown RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 OR52H1Q8NGJ2 320 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 OR13F1Q8NGS4 319 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 OR2L2Q8NH16 312 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 FAM222BQ8WU58 562 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 TCTEX1D2Q8WW35 142 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 HTR3CQ8WXA8 447 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 CHCHD10Q8WYQ3 142 aaPredicted RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 RAPGEF5Q92565 580 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 UFD1Q92890 307 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 FOXN4Q96NZ1 517 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 SIGLEC12Q96PQ1 595 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 CLCC1Q96S66 551 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 SLITRK2Q9H156 845 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 NT5MQ9NPB1 228 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 NANSQ9NR45 359 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 Q9UF83 564 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 APOBEC3BQ9UH17 382 aaKnown RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 STAP1Q9ULZ2 295 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 CA5BQ9Y2D0 317 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 PLLPQ9Y342 182 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 CSDC2Q9Y534 153 aaKnown RBP2.22□□□□□ -2.05
CD44-234ENST00000531873 FLVCR1Q9Y5Y0 555 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 SCN2AQ99250 2005 aa2.22□□□□□ -2.05
CD44-234ENST00000531873 GTF3C1Q12789 2109 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 COL5A2P05997 1499 aaPredicted RBP2.21□□□□□ -2.06
CD44-234ENST00000531873 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 IGLV8-61A0A075B6I0 122 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 HEATR9A2RTY3 570 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 ABCD4O14678 606 aa2.21□□□□□ -2.06
CD44-234ENST00000531873 BCL2L11O43521 198 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms