RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 HEATR1Q9H583 2144 aaKnown RBP18.35■□□□□ 0.53
CHKA-206ENST00000531341 NUP214P35658 2090 aaPredicted RBP18.35■□□□□ 0.53
CHKA-206ENST00000531341 IGHV1-18A0A0C4DH31 117 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 CLDN24A6NM45 220 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 SHBGP04278 402 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 FGF4P08620 206 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 IMPDH2P12268 514 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 DDX5P17844 614 aaKnown RBP18.34■□□□□ 0.53
CHKA-206ENST00000531341 CDH2P19022 906 aaPredicted RBP18.34■□□□□ 0.53
CHKA-206ENST00000531341 RPL3P39023 403 aaKnown RBP18.34■□□□□ 0.53
CHKA-206ENST00000531341 MAGEA8P43361 318 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 EMBQ6PCB8 327 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 C1orf162Q8NEQ5 155 aaPredicted RBP18.34■□□□□ 0.53
CHKA-206ENST00000531341 AGR3Q8TD06 166 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 MOAP1Q96BY2 351 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 TMEM181Q9P2C4 612 aa18.34■□□□□ 0.53
CHKA-206ENST00000531341 SPIN1Q9Y657 262 aaPredicted RBP18.34■□□□□ 0.53
CHKA-206ENST00000531341 TCF21O43680 179 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 SERPINF1P36955 418 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 PRPS1P60891 318 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 SLC17A1Q14916 467 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 XKR7Q5GH72 579 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 C6orf136Q5SQH8 315 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 IL23RQ5VWK5 629 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 TYW3Q6IPR3 259 aaKnown RBP18.33■□□□□ 0.52
CHKA-206ENST00000531341 GRINAQ7Z429 371 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 SPATA19Q7Z5L4 167 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 RFLNBQ8N5W9 214 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.33■□□□□ 0.52
CHKA-206ENST00000531341 ZIC4Q8N9L1 334 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 PPP3R2Q96LZ3 170 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 DUSP26Q9BV47 211 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 BHLHE41Q9C0J9 482 aaPredicted RBP18.33■□□□□ 0.52
CHKA-206ENST00000531341 OR51I1Q9H343 314 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 ATAD3AQ9NVI7 634 aa18.33■□□□□ 0.52
CHKA-206ENST00000531341 COPEO14579 308 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 AP3D1O14617 1153 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 DNPH1O43598 174 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 CFPP27918 469 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 MAPK1P28482 360 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 MPGP29372 298 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 IDH2P48735 452 aaKnown RBP18.32■□□□□ 0.52
CHKA-206ENST00000531341 SNRPD2P62316 118 aaKnown RBP18.32■□□□□ 0.52
CHKA-206ENST00000531341 FUT5Q11128 374 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 ZSWIM7Q19AV6 140 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 SLC46A3Q7Z3Q1 461 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 MEX3DQ86XN8 651 aaKnown RBP18.32■□□□□ 0.52
CHKA-206ENST00000531341 C4orf33Q8N1A6 199 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 ZCCHC24Q8N2G6 241 aaKnown RBP18.32■□□□□ 0.52
CHKA-206ENST00000531341 C16orf45Q96MC5 204 aaPredicted RBP18.32■□□□□ 0.52
CHKA-206ENST00000531341 CA10Q9NS85 328 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 TRAPPC4Q9Y296 219 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 SLC9A8Q9Y2E8 581 aa18.32■□□□□ 0.52
CHKA-206ENST00000531341 TMEM72A0PK05 275 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 ZC3H12DA2A288 527 aaKnown RBP18.31■□□□□ 0.52
CHKA-206ENST00000531341 DUXAA6NLW8 204 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 ANKRD28O15084 1053 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 TRIM13O60858 407 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 LYPLA1O75608 230 aaPredicted RBP18.31■□□□□ 0.52
CHKA-206ENST00000531341 STAMBPO95630 424 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 AK1P00568 194 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 C1QCP02747 245 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 OR12D1P0DN82 309 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 ARRB2P32121 409 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 LGALS3BPQ08380 585 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 ADIPOQQ15848 244 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 AP1ARQ63HQ0 302 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 VHLLQ6RSH7 139 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 NATD1Q8N6N6 113 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 RAB8BQ92930 207 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 SLC35G5Q96KT7 338 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 ZNF385AQ96PM9 386 aaKnown RBP18.31■□□□□ 0.52
CHKA-206ENST00000531341 SEC61A2Q9H9S3 476 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 PARPBPQ9NWS1 579 aa18.31■□□□□ 0.52
CHKA-206ENST00000531341 TMED7-TICAM2A0A0A6YYA0 188 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 RNF103-CHMP3A0A140T963 221 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 PRAMEF27A3QJZ7 478 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 LILRA1O75019 489 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 SKAP2O75563 359 aaPredicted RBP18.3■□□□□ 0.52
CHKA-206ENST00000531341 WNT11O96014 354 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 OR4A8P0C604 315 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 KRT4P19013 534 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 ALDH3A1P30838 453 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 CLK1P49759 484 aaKnown RBP18.3■□□□□ 0.52
CHKA-206ENST00000531341 TGFBR3Q03167 851 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 PGS1Q32NB8 556 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 OR4F3Q6IEY1 312 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 FRRS1Q6ZNA5 592 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 C16orf62Q7Z3J2 963 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 GSPT2Q8IYD1 628 aaKnown RBP18.3■□□□□ 0.52
CHKA-206ENST00000531341 FNDC5Q8NAU1 212 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 CNOT9Q92600 299 aaKnown RBP18.3■□□□□ 0.52
CHKA-206ENST00000531341 MECRQ9BV79 373 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 PLK3Q9H4B4 646 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 TMEFF2Q9UIK5 374 aaPredicted RBP18.3■□□□□ 0.52
CHKA-206ENST00000531341 OSGIN1Q9UJX0 560 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 SLC35A3Q9Y2D2 325 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 TMED7Q9Y3B3 224 aa18.3■□□□□ 0.52
CHKA-206ENST00000531341 SMIM23A6NLE4 172 aa18.29■□□□□ 0.52
CHKA-206ENST00000531341 B9A039 149 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms