RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 AP3D1O14617 1153 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 CSF3P09919 207 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 UQCRBP14927 111 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 CDH2P19022 906 aaPredicted RBP13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 HTR3AP46098 478 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 POLR2HP52434 150 aaKnown RBP13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC16A1P53985 500 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 FOXG1P55316 489 aaPredicted RBP13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 TGFBR3Q03167 851 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 CARTPTQ16568 116 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 SAXO2Q658L1 398 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 LSRQ86X29 649 aaPredicted RBP13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 C17orf78Q8N4C9 275 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 ZNF781Q8N8C0 355 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 OR10H5Q8NGA6 315 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 OIT3Q8WWZ8 545 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 KCNS3Q9BQ31 491 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 NAA11Q9BSU3 229 aaPredicted RBP13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 AKTIPQ9H8T0 292 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 EXOSC3Q9NQT5 275 aaKnown RBP13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 TMEM181Q9P2C4 612 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 TMED7Q9Y3B3 224 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 FKBP7Q9Y680 259 aa13.89□□□□□ -0.19
CHMP4A-204ENST00000530996 PRSS51A0A1B0GVH4 220 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 ATP6V1G2-DDX39BF2Z307 99 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 EIF1BO60739 113 aaKnown RBP13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 KRT33AO76009 404 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 SERPINE1P05121 402 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 MYZAPP0CAP1 466 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 FKBP2P26885 142 aaKnown RBP13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 ANXA11P50995 505 aaKnown RBP13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 CLNS1AP54105 237 aaKnown RBP13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC35A1P78382 337 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 KCNJ10P78508 379 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 VLDLRP98155 873 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 LOXL1Q08397 574 aaPredicted RBP13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 GNA13Q14344 377 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 CHI3L2Q15782 390 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 GABRA6Q16445 453 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 SMU1Q2TAY7 513 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 SPANXN4Q5MJ08 99 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 OR8J2Q8NGG1 315 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 WDR60Q8WVS4 1066 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 NEURL3Q96EH8 262 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 ZIM3Q96PE6 472 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 AMBRA1Q9C0C7 1298 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 SHARPINQ9H0F6 387 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC17A5Q9NRA2 495 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 PARPBPQ9NWS1 579 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 DCTN4Q9UJW0 460 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 FLVCR1Q9Y5Y0 555 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 PMF1-BGLAPU3KQ54 211 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 CR1P17927 2039 aa13.88□□□□□ -0.19
CHMP4A-204ENST00000530996 A0A096LNT2 108 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 TMEM72A0PK05 275 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 E9PBE3 544 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 ITM2AO43736 263 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 LY6HO94772 140 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 WNT11O96014 354 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 CREB1P16220 341 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 TACR3P29371 465 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 S100A3P33764 101 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 EFNA4P52798 201 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 NME5P56597 212 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 PHC1P78364 1004 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC25A3Q00325 362 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 GGTLC2Q14390 218 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 DPY19L1Q2PZI1 675 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 FAM174BQ3ZCQ3 159 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 CYB5R2Q6BCY4 276 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 RNF130Q86XS8 419 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 ADGRG3Q86Y34 549 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 CMIPQ8IY22 773 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 C1orf162Q8NEQ5 155 aaPredicted RBP13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 CNOT9Q92600 299 aaKnown RBP13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 TESCQ96BS2 214 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 TRIM44Q96DX7 344 aaPredicted RBP13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 FBXO17Q96EF6 278 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 CHODLQ9H9P2 273 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC7A10Q9NS82 523 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 LPAR3Q9UBY5 353 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 OSGIN1Q9UJX0 560 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 ABCA1O95477 2261 aa13.87□□□□□ -0.19
CHMP4A-204ENST00000530996 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 ELOA3DA6NLF2 546 aaPredicted RBP13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 SCN2BO60939 215 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 USF1P22415 310 aaPredicted RBP13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 NTF4P34130 210 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 PRPS1P60891 318 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 ABCE1P61221 599 aaKnown RBP13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 SNRPD2P62316 118 aaKnown RBP13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 ELOA3BQ3SY89 546 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 OTUD3Q5T2D3 398 aaPredicted RBP13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 TSPO2Q5TGU0 170 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 GPAT4Q86UL3 456 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 TRIML2Q8N7C3 387 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 ANKFN1Q8N957 763 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 ELOA3Q8NG57 546 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 PNPT1Q8TCS8 783 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms