RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, human

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-208	ENST00000530008	GLYR1	Q49A26	553 aa	Predicted RBP	4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	CARD16	Q5EG05	197 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	LRRC31	Q6UY01	552 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	GPRIN3	Q6ZVF9	776 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	PGAP1	Q75T13	922 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	OFCC1	Q8IZS5	231 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	OR56B4	Q8NH76	319 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	CCDC26	Q8TAB7	109 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	FAM81A	Q8TBF8	368 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	ELMO1	Q92556	727 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	PEX13	Q92968	403 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	RBKS	Q9H477	322 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	ZNF160	Q9HCG1	818 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	MIEF1	Q9NQG6	463 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	DPM3	Q9P2X0	92 aa		4.98	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	CCDC182	A6NF36	153 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	CDX4	O14627	284 aa	Predicted RBP	4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	HSD17B6	O14756	317 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	OXSR1	O95747	527 aa	Predicted RBP	4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	FTH1	P02794	183 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	MMP1	P03956	469 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	SLC35E2	P0CK97	266 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	ANXA13	P27216	316 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	C21orf59	P57076	290 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	ASPH	Q12797	758 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	PPIL2	Q13356	520 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	RUNX3	Q13761	415 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	SERTAD2	Q14140	314 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	SLC22A6	Q4U2R8	563 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	EIPR1	Q53HC9	387 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	C19orf35	Q6ZS72	473 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	OR4C5	Q8NGB2	326 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	OR4F6	Q8NGB9	312 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	UFD1	Q92890	307 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	NOL4L	Q96MY1	436 aa	Predicted RBP	4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	MBOAT4	Q96T53	435 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	RBM4B	Q9BQ04	359 aa	Known RBP	4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	TMCO1	Q9UM00	188 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	PLLP	Q9Y342	182 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008	STARD10	Q9Y365	291 aa		4.97	□□□□□ -1.61
CAPRIN1-208	ENST00000530008		A0A0J9YWU9	116 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SMCO3	A2RU48	225 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008		E9PQ18	207 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	GFY	I3L273	518 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	LSM1	O15116	133 aa	Known RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SLITRK3	O94933	977 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	LALBA	P00709	142 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	IGHV3-13	P01766	116 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	STAG3L3	P0CL85	134 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OR8G3P	P0DMU2	310 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	GCK	P35557	465 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	DDOST	P39656	456 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CCT6A	P40227	531 aa	Known RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	RPL34	P49207	117 aa	Known RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	LMO4	P61968	165 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SLC10A7	Q0GE19	358 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OXA1L	Q15070	435 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OR5M10	Q6IEU7	315 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OR52E8	Q6IFG1	317 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	LUZP2	Q86TE4	346 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	ERI1	Q8IV48	349 aa	Known RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	NUDCD3	Q8IVD9	361 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	NAXD	Q8IW45	347 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OR2A12	Q8NGT7	310 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	ZPLD1	Q8TCW7	415 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	TSEN15	Q8WW01	171 aa	Known RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SEC22A	Q96IW7	307 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	KCNA7	Q96RP8	456 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	RANBP9	Q96S59	729 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	VGLL1	Q99990	258 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	BPIFA3	Q9BQP9	254 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	RPRD1B	Q9NQG5	326 aa	Known RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	THUMPD1	Q9NXG2	353 aa	Known RBP	4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CLEC5A	Q9NY25	188 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	GCNT4	Q9P109	453 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OR1A1	Q9P1Q5	309 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PHLPP2	Q6ZVD8	1323 aa		4.96	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PLEKHH1	Q9ULM0	1364 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	DHRS7C	A6NNS2	312 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	DUSP14	O95147	198 aa	Known RBP	4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SERPIND1	P05546	499 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CT62	P0C5K7	136 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	RNF224	P0DH78	156 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	PGAM2	P15259	253 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CALCR	P30988	508 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	KIR2DS2	P43631	304 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	ACLY	P53396	1101 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	RGS8	P57771	180 aa	Predicted RBP	4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	KCNJ2	P63252	427 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CHRNB3	Q05901	458 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SCRN3	Q0VDG4	424 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	QRICH1	Q2TAL8	776 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	SBK1	Q52WX2	424 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	CAVIN4	Q5BKX8	364 aa		4.95	□□□□□ -1.62
CAPRIN1-208	ENST00000530008	OR2G6	Q5TZ20	316 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms