RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 TSEN54Q7Z6J9 526 aaKnown RBP12.58□□□□□ -0.4
USF1-209ENST00000529476 FJX1Q86VR8 437 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ELOA3Q8NG57 546 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 OR10D3Q8NH80 312 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 OR2V1Q8NHB1 315 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ZPLD1Q8TCW7 415 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 SLC25A43Q8WUT9 341 aaPredicted RBP12.58□□□□□ -0.4
USF1-209ENST00000529476 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
USF1-209ENST00000529476 SLC38A4Q969I6 547 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 SLC47A1Q96FL8 570 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ARL5BQ96KC2 179 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 LRGUKQ96M69 825 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 OR5B2Q96R09 309 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 TRIB1Q96RU8 372 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 COQ10BQ9H8M1 238 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 SELENONQ9NZV5 590 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 POMPQ9Y244 141 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 MEMO1Q9Y316 297 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 HIVEP3Q5T1R4 2406 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 J3KTA2 159 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 hCG_2039718K7EN88 272 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 LRRTM2O43300 516 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 SEMG1P04279 462 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 PNMTP11086 282 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 PTNP21246 168 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 SLC7A1P30825 629 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 TAS2R41P59536 307 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 RPS3AP61247 264 aaKnown RBP12.57□□□□□ -0.4
USF1-209ENST00000529476 VLDLRP98155 873 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 FOXD4Q12950 439 aaPredicted RBP12.57□□□□□ -0.4
USF1-209ENST00000529476 FLOT2Q14254 428 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 SGCBQ16585 318 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 PDSS1Q5T2R2 415 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 MYO7BQ6PIF6 2116 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 WDR88Q6ZMY6 472 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 CHMP1BQ7LBR1 199 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 GDF7Q7Z4P5 450 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 MARVELD2Q8N4S9 558 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 OSTF1Q92882 214 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 DDIT4LQ96D03 193 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 SLC41A3Q96GZ6 507 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 C7orf34Q96L11 122 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 DMRTA2Q96SC8 542 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 SEPHS2Q99611 448 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 SRXN1Q9BYN0 137 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 TRIM15Q9C019 465 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 MMADHCQ9H3L0 296 aaPredicted RBP12.57□□□□□ -0.4
USF1-209ENST00000529476 C12orf10Q9HB07 376 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 RIMS3Q9UJD0 308 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 SLC7A7Q9UM01 511 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 A4GNTQ9UNA3 340 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 ENPP4Q9Y6X5 453 aa12.57□□□□□ -0.4
USF1-209ENST00000529476 IGKV1D-42A0A075B6H8 117 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 A0A087WUJ7 227 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 A0A1B0GUH1 482 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 A8MVM7 634 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 E9PLN8 166 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 FFAR1O14842 300 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 CHP2O43745 196 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 OR5F1O95221 314 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 HOXD4P09016 255 aaPredicted RBP12.56□□□□□ -0.4
USF1-209ENST00000529476 RNF224P0DH78 156 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 FUT4P22083 530 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 PTGER4P35408 488 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 ERFP50548 548 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 MAP2K6P52564 334 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 CARD18P57730 90 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 EGR4Q05215 589 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 MYBPHQ13203 477 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 PON3Q15166 354 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 SF3B4Q15427 424 aaKnown RBP eCLIP12.56□□□□□ -0.4
USF1-209ENST00000529476 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
USF1-209ENST00000529476 NSUN5P2Q63ZY6 315 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 LINC00114Q6XXX2 140 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 B3GNT6Q6ZMB0 384 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 SEM1Q6ZVN7 128 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 P3H2Q8IVL5 708 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 UTP4Q969X6 686 aaKnown RBP12.56□□□□□ -0.4
USF1-209ENST00000529476 PRRC1Q96M27 445 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 VKORC1Q9BQB6 163 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 TTYH2Q9BSA4 534 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 POLR2J2Q9GZM3 115 aaKnown RBP12.56□□□□□ -0.4
USF1-209ENST00000529476 POLR2J3Q9H1A7 115 aaKnown RBP12.56□□□□□ -0.4
USF1-209ENST00000529476 NDUFAF4Q9P032 175 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 RHCGQ9UBD6 479 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 CLCF1Q9UBD9 225 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
USF1-209ENST00000529476 CD8B2A6NJW9 211 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 AQP12BA6NM10 295 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 SULT2B1O00204 365 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 NPIPB7O75200 414 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 DIRAS1O95057 198 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 TGM6O95932 706 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 GLI4P10075 376 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 IMPDH2P12268 514 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 FKBP2P26885 142 aaKnown RBP12.55□□□□□ -0.4
USF1-209ENST00000529476 CLK1P49759 484 aaKnown RBP12.55□□□□□ -0.4
USF1-209ENST00000529476 DIO1P49895 249 aa12.55□□□□□ -0.4
USF1-209ENST00000529476 NUP107P57740 925 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms