RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MAPK14Q16539 360 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 SGCBQ16585 318 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 GSTA3Q16772 222 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 NDUFAF6Q330K2 333 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 ANKRD46Q86W74 232 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 ZNF619Q8N2I2 560 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 LINC01560Q8TB33 94 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 SLC25A43Q8WUT9 341 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-218ENST00000528877 NRGNQ92686 78 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 ROPN1LQ96C74 230 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 PANX1Q96RD7 426 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 ZBTB18Q99592 522 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 PAIP2Q9BPZ3 127 aaKnown RBP6.29□□□□□ -1.4
ITGB1-218ENST00000528877 SLC35A5Q9BS91 424 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 SRXN1Q9BYN0 137 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 SLC38A1Q9H2H9 487 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 WDR55Q9H6Y2 383 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-218ENST00000528877 TMEM185BQ9H7F4 350 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 MANSC1Q9H8J5 431 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 BCO1Q9HAY6 547 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 TIGARQ9NQ88 270 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 ZNF226Q9NYT6 803 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 MARCOQ9UEW3 520 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-218ENST00000528877 MKLN1Q9UL63 735 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 LIPT1Q9Y234 373 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 WDR45Q9Y484 360 aa6.29□□□□□ -1.4
ITGB1-218ENST00000528877 PCNX3Q9H6A9 2034 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ZANQ9Y493 2812 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 NAV3Q8IVL0 2385 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 IGKV3D-15A0A087WSY6 115 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CCDC154A6NI56 674 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 AGAP5A6NIR3 686 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 GTPBP1O00178 669 aaKnown RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 GCM2O75603 506 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 TGDSO95455 350 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 H6PDO95479 791 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 NUDT14O95848 222 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 PLGP00747 810 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CSTAP01040 98 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 OR12D1P0DN82 309 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 HOXB9P17482 250 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 PGCP20142 388 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 DNASE1P24855 282 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 FKBP2P26885 142 aaKnown RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 SFTPDP35247 375 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CHI3L1P36222 383 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CDKN2CP42773 168 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 MAP2K6P52564 334 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CARD18P57730 90 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 RAC3P60763 192 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 FAM27E3Q08E93 113 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 PDK3Q15120 406 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 SLC9B1Q4ZJI4 515 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 GTF2IRD2BQ6EKJ0 949 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ABLIM2Q6H8Q1 611 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 TNFAIP8L2Q6P589 184 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 TFAP2EQ6VUC0 442 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 STAC2Q6ZMT1 411 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 LRRC74BQ6ZQY2 392 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 PLEKHM3Q6ZWE6 761 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 GTF2IRD2Q86UP8 949 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 STK32CQ86UX6 486 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CLEC4FQ8N1N0 589 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 SLC43A2Q8N370 569 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 TMCO5AQ8N6Q1 288 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ZNF614Q8N883 585 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ZNF610Q8N9Z0 462 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 MGARPQ8TDB4 240 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 TMEM234Q8WY98 164 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 OSTF1Q92882 214 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ARL8AQ96BM9 186 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 RCC1LQ96I51 464 aaKnown RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 WFIKKN1Q96NZ8 548 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 OR52E6Q96RD3 313 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 PIP5K1AQ99755 562 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 PSD2Q9BQI7 771 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 MED18Q9BUE0 208 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CCDC106Q9BWC9 280 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 LIME1Q9H400 295 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 FANCFQ9NPI8 374 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 CCM2LQ9NUG4 571 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ACER3Q9NUN7 267 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 TMEM45AQ9NWC5 275 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 BEX4Q9NWD9 120 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 KLHL9Q9P2J3 617 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ING1Q9UK53 422 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 GMEB1Q9Y692 573 aa6.28□□□□□ -1.4
ITGB1-218ENST00000528877 RAI1Q7Z5J4 1906 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-218ENST00000528877 ACANP16112 2415 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 GOLGA8QA0A0J9YX86 632 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 ANKRD34BA5PLL1 514 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 GOLGA8OA6NCC3 632 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 ZNF724A8MTY0 619 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 NPIPB6E9PJ23 425 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 GOLGA8NF8WBI6 632 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 RFXANKO14593 260 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 SMAD9O15198 467 aaKnown RBP6.27□□□□□ -1.41
ITGB1-218ENST00000528877 UBDO15205 165 aa6.27□□□□□ -1.41
ITGB1-218ENST00000528877 CYTIPO60759 359 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms