RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TNFRSF11BO00300 401 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 GNGT2O14610 69 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 OPN1LWP04000 364 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 PEPDP12955 493 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ZNF26P17031 533 aaPredicted RBP10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 SHC1P29353 583 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 STARP49675 285 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 AQP4P55087 323 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 SMIM11AP58511 58 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 EGR4Q05215 589 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 MED21Q13503 144 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 LAPTM4AQ15012 233 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 LRRC36Q1X8D7 754 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 EXOC3L2Q2M3D2 409 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 FAM180AQ6UWF9 173 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ATP6V1C2Q8NEY4 427 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 NEIL3Q8TAT5 605 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 SNRNP40Q96DI7 357 aaKnown RBP10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ALPK1Q96QP1 1244 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 OR11A1Q9GZK7 315 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 Q9H521 79 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 ANKRD19PQ9H560 264 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 TMEM185BQ9H7F4 350 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 CHRNA9Q9UGM1 479 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 NBASA2RRP1 2371 aa10.96□□□□□ -0.65
TRAF3IP2-211ENST00000528599 HELZ2Q9BYK8 2649 aaKnown RBP10.96□□□□□ -0.66
TRAF3IP2-211ENST00000528599 A6NHS1 94 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 H3BML4 177 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 BMP7P18075 431 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 CHMP24386 653 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ELK4P28324 431 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 UGT2B15P54855 530 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 SELENBP1Q13228 472 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 DCST1Q5T197 706 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 C1QL3Q5VWW1 255 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 MARVELD2Q8N4S9 558 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 PACRGLQ8N7B6 248 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TMEM239Q8WW34 195 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ACOT11Q8WXI4 607 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 CENPNQ96H22 339 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 EPYCQ99645 322 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TMEM43Q9BTV4 400 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 LDAHQ9H6V9 325 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 MEPEQ9NQ76 525 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 SERINC1Q9NRX5 453 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ASF1BQ9NVP2 202 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 SPRR3Q9UBC9 169 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TNFRSF10DQ9UBN6 386 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ZNF407Q9C0G0 2248 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 A0A1B0GVC2 190 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 SH3PXD2BA1X283 911 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 A8MVM7 634 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 H0YC42 278 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 KPNA4O00629 521 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ZNHIT1O43257 154 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ZNF208O43345 1280 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 PIP5K1CO60331 668 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 HCN1O60741 890 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 NPIPB7O75200 414 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 DNAJA1P31689 397 aaKnown RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 SFTPDP35247 375 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 RBM34P42696 430 aaKnown RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TPD52P55327 224 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 CLDN20P56880 219 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 RAC1P63000 192 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 HSF1Q00613 529 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 C19orf57Q0VDD7 668 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 PPP4R4Q6NUP7 873 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 C3orf33Q6P1S2 294 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TTC33Q6PID6 262 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 HS3ST5Q8IZT8 346 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 PFN4Q8NHR9 129 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 FAR1Q8WVX9 515 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 SMPDL3BQ92485 455 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 EME1Q96AY2 570 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 DNAJA3Q96EY1 480 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ARL5BQ96KC2 179 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 HS6ST2Q96MM7 605 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 BDH2Q9BUT1 245 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 EXO5Q9H790 373 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TMCC3Q9ULS5 477 aa10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 MAGED1Q9Y5V3 778 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-211ENST00000528599 FASNP49327 2511 aaKnown RBP10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 UBR5O95071 2799 aaPredicted RBP10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 EIF4E1BA6NMX2 242 aaKnown RBP10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 LINC01387J3KSC0 135 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 E2F6O75461 281 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 POU3F2P20265 443 aaPredicted RBP10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 FPR1P21462 350 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 LHX2P50458 406 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TDGF1P3P51864 188 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 MAP2K6P52564 334 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 MLLT10P55197 1068 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 CLDN15P56746 228 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 CRYZQ08257 329 aaKnown RBP10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 TMEM176BQ3YBM2 270 aaPredicted RBP10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 SYT14P1Q58G82 188 aa10.94□□□□□ -0.66
TRAF3IP2-211ENST00000528599 NHSL2Q5HYW2 709 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms