RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475		A0A0J9YY10	115 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	PVR	P15151	417 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SRP54	P61011	504 aa	Known RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	RPS11	P62280	158 aa	Known RBP eCLIP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	ULK3	Q6PHR2	472 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	UNQ9370/PRO34162	Q6UXP9	181 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SIAH3	Q8IW03	269 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SLC35F2	Q8IXU6	374 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	CSNK1A1L	Q8N752	337 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	OR11H7	Q8NGC8	314 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZMYND19	Q96E35	227 aa	Predicted RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	ARSG	Q96EG1	525 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SIPA1	Q96FS4	1042 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	GPR137	Q96N19	417 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	OR51J1	Q9H342	316 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	TEX13C	A0A0J9YWL9	993 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475		A0A1B0GTQ1	180 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SYNDIG1L	A6NDD5	238 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	CD3G	P09693	182 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SNRPB	P14678	240 aa	Known RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	HIST1H1C	P16403	213 aa	Known RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	S1PR1	P21453	382 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	HNRNPA2B1	P22626	353 aa	Known RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZNF141	Q15928	474 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	FAM109B	Q6ICB4	259 aa	Predicted RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	DGAT2L6	Q6ZPD8	337 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	FAM98A	Q8NCA5	519 aa	Known RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SDR9C7	Q8NEX9	313 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	OR14A16	Q8NHC5	309 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	RPP25	Q9BUL9	199 aa	Known RBP	21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	SLCO1C1	Q9NYB5	712 aa		21.51	■■□□□ 1.03
GSDMD-208	ENST00000528475	ANXA3	P12429	323 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	DGCR2	P98153	550 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	LGALS3BP	Q08380	585 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	DYRK1A	Q13627	763 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	FGFBP1	Q14512	234 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	ALG11	Q2TAA5	492 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	CDH24	Q86UP0	819 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZNF614	Q8N883	585 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	OR4K13	Q8NH42	304 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	PHF21A	Q96BD5	680 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	CACNG6	Q9BXT2	260 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZFP64	Q9NPA5	681 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	POT1	Q9NUX5	634 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	TEKT2	Q9UIF3	430 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	LAMA3	Q16787	3333 aa		21.5	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZNF749	O43361	778 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	IGKV1D-16	P01601	117 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	DIO1	P49895	249 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	GPR143	P51810	404 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	HCCS	P53701	268 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZNHIT3	Q15649	155 aa	Predicted RBP	21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	ARL14	Q8N4G2	192 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	OR4D9	Q8NGE8	314 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	ANGPTL6	Q8NI99	470 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	SGTB	Q96EQ0	304 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	MRPL48	Q96GC5	212 aa	Known RBP	21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	CDCA3	Q99618	268 aa	Predicted RBP	21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	BRD7	Q9NPI1	651 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	MKKS	Q9NPJ1	570 aa	Predicted RBP	21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	NRIP3	Q9NQ35	241 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	GPRIN2	O60269	458 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	TMEM127	O75204	238 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	SLC35D3	Q5M8T2	416 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	SLC22A10	Q63ZE4	541 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	LYPD8	Q6UX82	237 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	BTN2A1	Q7KYR7	527 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	RPS4Y2	Q8TD47	263 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	B3GNT2	Q9NY97	397 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	SLC23A1	Q9UHI7	598 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	IER3IP1	Q9Y5U9	82 aa		21.49	■■□□□ 1.03
GSDMD-208	ENST00000528475	SCN2A	Q99250	2005 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	NPIPB9	F8W1W9	429 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	OR10H2	O60403	315 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	KLF8	O95600	359 aa	Predicted RBP	21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	GIF	P27352	417 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	YPEL5	P62699	121 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	HSF2	Q03933	536 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	KLF9	Q13886	244 aa	Predicted RBP	21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	ISX	Q2M1V0	245 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	C9orf50	Q5SZB4	431 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	KIRREL2	Q6UWL6	708 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	DPY19L2P2	Q6ZN68	376 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	SNX33	Q8WV41	574 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	SMIM4	Q8WVI0	70 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	DDO	Q99489	341 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	ACTR6	Q9GZN1	396 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	PCDHGA9	Q9Y5G4	932 aa	Known RBP	21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	TYRP1	P17643	537 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	PON3	Q15166	354 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	UBE2NL	Q5JXB2	153 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZC3H14	Q6PJT7	736 aa	Known RBP	21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZNF431	Q8TF32	576 aa	Predicted RBP	21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	HGD	Q93099	445 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	ZFP3	Q96NJ6	502 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	GSDMC	Q9BYG8	508 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	NCDN	Q9UBB6	729 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	CPNE7	Q9UBL6	633 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	RPS6KB2	Q9UBS0	482 aa		21.48	■■□□□ 1.03
GSDMD-208	ENST00000528475	TRBV2	A0A0J9YWF9	115 aa		21.47	■■□□□ 1.03

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms