RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 ZNF671Q8TAW3 534 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 SNX33Q8WV41 574 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 AKAP1Q92667 903 aaKnown RBP eCLIP6.86□□□□□ -1.31
C11orf54-207ENST00000528288 POT1Q9NUX5 634 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 SLC35A3Q9Y2D2 325 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 CACNG2Q9Y698 323 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 DENND4AQ7Z401 1863 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 SLC22A31A6NKX4 558 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 BLOC1S5-TXNDC5H3BN57 136 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 SLC19A2O60779 497 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 PTP4A3O75365 173 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 GPANK1O95872 356 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 HLA-DQB1P01920 261 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 AHCYP23526 432 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 GDI2P50395 445 aaKnown RBP6.86□□□□□ -1.31
C11orf54-207ENST00000528288 ENPP2Q13822 863 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 KCNAB1Q14722 419 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 TAF8Q7Z7C8 310 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 OR8H1Q8NGG4 311 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 OR8K3Q8NH51 312 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 ZFAND1Q8TCF1 268 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 SLC37A2Q8TED4 501 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 TRIM63Q969Q1 353 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 PELI1Q96FA3 418 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 MED28Q9H204 178 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 CPNE7Q9UBL6 633 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 RWDD3Q9Y3V2 267 aa6.86□□□□□ -1.31
C11orf54-207ENST00000528288 PRR32B1ATL7 298 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 B4DGG1 531 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ARHGEF9O43307 516 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 HK1P19367 917 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ACAA2P42765 397 aaKnown RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TSFMP43897 325 aaKnown RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SOX2P48431 317 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 KIR2DS3Q14952 304 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 KANSL1Q7Z3B3 1105 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ZNF687Q8N1G0 1237 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TSPAN10Q9H1Z9 355 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ING1Q9UK53 422 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 A0A0B4J2E0 115 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TRBV2A0A0J9YWF9 115 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 A0A1B0GX12 115 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 RAD1O60671 282 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 GALR3O60755 368 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 AGR2O95994 175 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 WNT1P04628 370 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 THBS1P07996 1170 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 F8A1P23610 371 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SLC6A1P30531 599 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TPMTP51580 245 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ATP12AP54707 1039 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ACSM1Q08AH1 577 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 MAB21L1Q13394 359 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 FHL1Q13642 323 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SHHQ15465 462 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SLC36A2Q495M3 483 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 PLA1AQ53H76 456 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 LRRC28Q86X40 367 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TOMM5Q8N4H5 51 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 DNAAF1Q8NEP3 725 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 OR11H4Q8NGC9 324 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 MOSPD2Q8NHP6 518 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 RPLP0P6Q8NHW5 317 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 LGALS14Q8TCE9 139 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 NR4A3Q92570 626 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SLC22A18Q96BI1 424 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 HSPA12BQ96MM6 686 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ELF4Q99607 663 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 CHIAQ9BZP6 476 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 DNAJB12Q9NXW2 375 aaKnown RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 RPS6KB2Q9UBS0 482 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 MGAT4AQ9UM21 535 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 VPS13AQ96RL7 3174 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TEX13CA0A0J9YWL9 993 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TCRBV21S2A2A0A5A6 115 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 OR6C68A6NDL8 312 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 URADA6NGE7 173 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 PLPP2O43688 288 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SLC43A1O75387 559 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ATP1B1P05026 303 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 F13BP05160 661 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TRAPPC2P0DI81 140 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TRAPPC2BP0DI82 140 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 RPS4Y1P22090 263 aaKnown RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SLC2A5P22732 501 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ERP29P30040 261 aaKnown RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 STX4Q12846 297 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ILF3Q12906 894 aaKnown RBP eCLIP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TMEM44Q2T9K0 475 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TMEM255AQ5JRV8 349 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 NPSR1Q6W5P4 371 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TMPRSS11FQ6ZWK6 438 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 PRR22Q8IZ63 422 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 TCTE3Q8IZS6 198 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 SLC22A18ASQ8N1D0 253 aa6.85□□□□□ -1.31
C11orf54-207ENST00000528288 FAM160A2Q8N612 972 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-207ENST00000528288 ZNF655Q8N720 491 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms