RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZNF300Q96RE9 604 aaPredicted RBP29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 CHST2Q9Y4C5 530 aa29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 PRRC2AP48634 2157 aaKnown RBP29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 ITPR3Q14573 2671 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 TMEM72A0PK05 275 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 ZNF814B7Z6K7 855 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 EIF1BO60739 113 aaKnown RBP29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 PGM3O95394 542 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 GKN3PP0CG01 181 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 ARAFP10398 606 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 COPZ1P61923 177 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 DEFB113Q30KQ7 82 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 WBP2NLQ6ICG8 309 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 CLIP4Q8N3C7 705 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 NPHS2Q9NP85 383 aa29.31■■■□□ 2.28
SSSCA1-205ENST00000527920 ZNF716A6NP11 495 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 C5orf58C9J3I9 102 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 GPR171O14626 319 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 KLF4O43474 513 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 NR1H2P55055 460 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 SLC35A1P78382 337 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 ZNF311Q5JNZ3 666 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 GCNT6Q5T4J0 391 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 TSPEARQ8WU66 669 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 POTEKPQ9BYX7 375 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 TMEM38AQ9H6F2 299 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 DCTN4Q9UJW0 460 aa29.3■■■□□ 2.28
SSSCA1-205ENST00000527920 GPX2P18283 190 aa29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 CD53P19397 219 aa29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 NCF2P19878 526 aaPredicted RBP29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 CCNA2P20248 432 aa29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 ITGADQ13349 1161 aa29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 METTL21CQ5VZV1 264 aa29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 KISS1RQ969F8 398 aaPredicted RBP29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 S100PBPQ96BU1 408 aa29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 LEF1Q9UJU2 399 aaPredicted RBP29.29■■■□□ 2.28
SSSCA1-205ENST00000527920 FREM1Q5H8C1 2179 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 ADAP00813 363 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 IL32P24001 234 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 CXCR1P25024 350 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 OR2B6P58173 313 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 DLEU7Q6UYE1 221 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 DPP10Q8N608 796 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 THOC1Q96FV9 657 aaKnown RBP29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 HS3ST6Q96QI5 342 aa29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 BEX4Q9NWD9 120 aaPredicted RBP29.28■■■□□ 2.28
SSSCA1-205ENST00000527920 EVPLLA8MZ36 301 aa29.27■■■□□ 2.28
SSSCA1-205ENST00000527920 IMPDH2P12268 514 aa29.27■■■□□ 2.28
SSSCA1-205ENST00000527920 PRKAR1BP31321 381 aa29.27■■■□□ 2.28
SSSCA1-205ENST00000527920 REEP3Q6NUK4 255 aa29.27■■■□□ 2.28
SSSCA1-205ENST00000527920 C10orf111Q8N326 155 aa29.27■■■□□ 2.28
SSSCA1-205ENST00000527920 PRG2P13727 222 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 COX5AP20674 150 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 CDK6Q00534 326 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 PAQR6Q6TCH4 344 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 SERPINA11Q86U17 422 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 KRT73Q86Y46 540 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 ZNF100Q8IYN0 542 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 CADM2Q8N3J6 435 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 HSD17B8Q92506 261 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 CPPED1Q9BRF8 314 aaPredicted RBP29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 NAA11Q9BSU3 229 aaPredicted RBP29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 IKZF5Q9H5V7 419 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 NIPSNAP3AQ9UFN0 247 aaPredicted RBP29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 PRSS50Q9UI38 385 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 NOSIPQ9Y314 301 aaKnown RBP29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 NDUFAF1Q9Y375 327 aa29.26■■■□□ 2.27
SSSCA1-205ENST00000527920 A0A0G2JND7 137 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 ZC3H12DA2A288 527 aaKnown RBP29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 FPR1P21462 350 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 IDUAP35475 653 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 ACKR1Q16570 336 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 C20orf204Q6ZNR8 217 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 SSX8Q7RTT4 187 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 WFDC8Q8IUA0 241 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 NFKBIDQ8NI38 313 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 ZNF775Q96BV0 537 aaPredicted RBP29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 PIP5K1AQ99755 562 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 SPATA5L1Q9BVQ7 753 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 ZNF446Q9NWS9 450 aa29.25■■■□□ 2.27
SSSCA1-205ENST00000527920 MED13LQ71F56 2210 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 A8MVM7 634 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 GPIP06744 558 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 EDNRAP25101 427 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 DHRS4L2Q6PKH6 230 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 BHLHA15Q7RTS1 189 aaPredicted RBP29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 TGIF2LYQ8IUE0 185 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 C3orf49Q96BT1 292 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 DNAJA3Q96EY1 480 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 TMEM204Q9BSN7 226 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 NGBQ9NPG2 151 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 MRGBPQ9NV56 204 aa29.24■■■□□ 2.27
SSSCA1-205ENST00000527920 LIPT2A6NK58 231 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 ANGPT2O15123 496 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 ADRM1Q16186 407 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 RUNDC3AQ59EK9 446 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 FBXW9Q5XUX1 488 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 DHDDSQ86SQ9 333 aa29.23■■■□□ 2.27
SSSCA1-205ENST00000527920 CCDC103Q8IW40 242 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms