RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 INSIG1O15503 277 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 B4GALT5O43286 388 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TGOLN2O43493 480 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 GPRIN2O60269 458 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 MOSPD3O75425 235 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SLC25A12O75746 678 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 YIF1AO95070 293 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 WISP3O95389 354 aaPredicted RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 MT-ND4P03905 459 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ADRA2AP08913 450 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 FAM87AP0C7U9 286 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 GPR89BP0CG08 455 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 NR2F1P10589 423 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TFPIP10646 304 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SLC25A4P12235 298 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 BCKDHBP21953 392 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SHC1P29353 583 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SLC1A2P43004 574 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TM4SF4P48230 202 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ART1P52961 327 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 FOXA1P55317 472 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 CLDN8P56748 225 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 VAMP2P63027 116 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ID3Q02535 119 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 PLA2G7Q13093 441 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 PPIGQ13427 754 aaKnown RBP eCLIP5.38□□□□□ -1.55
CD44-225ENST00000527326 IL10RAQ13651 578 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SLBPQ14493 270 aaKnown RBP eCLIP5.38□□□□□ -1.55
CD44-225ENST00000527326 JOSD1Q15040 202 aaPredicted RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 RHEBQ15382 184 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 KCNA10Q16322 511 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 QRICH1Q2TAL8 776 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 GFOD2Q3B7J2 385 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TKFCQ3LXA3 575 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 KRTCAP3Q53RY4 240 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 AKR1C8PQ5T2L2 129 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 DCAF15Q66K64 600 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OLFML2AQ68BL7 652 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 LEMD1Q68G75 181 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OVOS1Q6IE37 1185 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 C1orf94Q6P1W5 598 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TMEM71Q6P5X7 295 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SLC27A1Q6PCB7 646 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 B3GNT9Q6UX72 402 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 B3GLCTQ6Y288 498 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 Q6ZPB1 254 aaPredicted RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 RPS27LQ71UM5 84 aaKnown RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 PID1Q7Z2X4 250 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 DNAJB7Q7Z6W7 309 aaPredicted RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 LRRTM1Q86UE6 522 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 MARCH9Q86YJ5 346 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 MSRB3Q8IXL7 192 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 BAP18Q8IXM2 172 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 LAS2Q8IYD9 372 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 GPR65Q8IYL9 337 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 GTPBP8Q8N3Z3 284 aaPredicted RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 SLC5A8Q8N695 610 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ACBD4Q8NC06 268 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 HJURPQ8NCD3 748 aaPredicted RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 OR7G2Q8NG99 324 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OR11G2Q8NGC1 345 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OR52N4Q8NGI2 321 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OR4C15Q8NGM1 316 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OR1N1Q8NGS0 311 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OR9A4Q8NGU2 314 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 OR13D1Q8NGV5 346 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 FIBINQ8TAL6 211 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 NEIL3Q8TAT5 605 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 RNASEH2CQ8TDP1 164 aaKnown RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 NPRL2Q8WTW4 380 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 RNF141Q8WVD5 230 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 MYLIPQ8WY64 445 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ING5Q8WYH8 240 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TFAP2BQ92481 460 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TAAR8Q969N4 342 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 CMBLQ96DG6 245 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 RNFT2Q96EX2 444 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 BOD1Q96IK1 185 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SMIM8Q96KF7 97 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SGCZQ96LD1 299 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 FEVQ99581 238 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ZNF426Q9BUY5 554 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SF3B5Q9BWJ5 86 aaKnown RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 C1QTNF3Q9BXJ4 246 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SNHG12Q9BXW3 62 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ACTR3CQ9C0K3 210 aaPredicted RBP5.38□□□□□ -1.55
CD44-225ENST00000527326 COMMD4Q9H0A8 199 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 PCED1AQ9H1Q7 454 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 SYT4Q9H2B2 425 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ATXN3LQ9H3M9 355 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ALG9Q9H6U8 611 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 EXO5Q9H790 373 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 LMAN1LQ9HAT1 526 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 BRF2Q9HAW0 419 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ACKR4Q9NPB9 350 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 RPS10P5Q9NQ39 176 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 UBQLN4Q9NRR5 601 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 CISHQ9NSE2 258 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 TMEM100Q9NV29 134 aa5.38□□□□□ -1.55
CD44-225ENST00000527326 ASIC5Q9NY37 505 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms