RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ACSL5Q9ULC5 683 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 CAMK2AQ9UQM7 478 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 RCE1Q9Y256 329 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 RPS10-NUDT3A0A1W2PQS6 291 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 CDK2AP1O14519 115 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 PPP1R3DO95685 299 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 HOXB2P14652 356 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 DRD3P35462 400 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 DUSP5Q16690 384 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 EIPR1Q53HC9 387 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TMEM65Q6PI78 240 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ADAMTSL4Q6UY14 1074 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ARL14Q8N4G2 192 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF614Q8N883 585 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 KCT2Q8NC54 265 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 GRHL3Q8TE85 626 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 GIMAP5Q96F15 307 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF681Q96N22 645 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 PRSS27Q9BQR3 290 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 C20orf85Q9H1P6 137 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 WDR26Q9H7D7 661 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 CAPN10Q9HC96 672 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 SLC6A20Q9NP91 592 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 USP36Q9P275 1121 aaKnown RBP11.55□□□□□ -0.56
CAPN1-208ENST00000527323 PLEKHM1Q9Y4G2 1056 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 A0A1W2PPL8 197 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ARL6IP5O75915 188 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SERPINA3P01011 423 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ALDOBP05062 364 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF136P52737 540 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ID2Q02363 134 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 TOMM20Q15388 145 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SLC25A25Q6KCM7 469 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SSX6Q7RTT6 188 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 PXKQ7Z7A4 578 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SERPINA12Q8IW75 414 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF433Q8N7K0 673 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 OR51Q1Q8NH59 317 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ZMYND19Q96E35 227 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 PGLYRP3Q96LB9 341 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 DDOQ99489 341 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 C1QTNF7Q9BXJ2 289 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 RPS6KB2Q9UBS0 482 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SLC35A3Q9Y2D2 325 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 MED31Q9Y3C7 131 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 LRRK1Q38SD2 2015 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 GMDSO60547 372 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF3P17036 446 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 VEGFCP49767 419 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 MFSD13AQ14CX5 517 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 MAPK14Q16539 360 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 HSD17B12Q53GQ0 312 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 DMKNQ6E0U4 476 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 TMEM184AQ6ZMB5 413 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 LRRC25Q8N386 305 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 LGALS14Q8TCE9 139 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SNX33Q8WV41 574 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 PEX11GQ96HA9 241 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 MS4A4EQ96PG1 132 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 C7orf50Q9BRJ6 194 aaKnown RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ADGRL4Q9HBW9 690 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SPHK1Q9NYA1 384 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SLC27A6Q9Y2P4 619 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 AUP1Q9Y679 476 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SLCO1B1Q9Y6L6 691 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 EP300Q09472 2414 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SCN3AQ9NY46 2000 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 KHDRBS3O75525 346 aaKnown RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 TFP02787 698 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 UGT2B7P16662 529 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 HTR2AP28223 471 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 NAA10P41227 235 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 GDI2P50395 445 aaKnown RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 GBX2P52951 348 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ZP1P60852 638 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SIM1P81133 766 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 TCTE1Q5JU00 501 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 MRPL2Q5T653 305 aaKnown RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 HES5Q5TA89 166 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 FAAH2Q6GMR7 532 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 Q6ZTK2 550 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ASPGQ86U10 573 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 OR52E1Q8NGJ3 308 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ORAI1Q96D31 301 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 NECAB3Q96P71 396 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-208ENST00000527323 OR14A2Q96R54 314 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 SDF2Q99470 211 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 PRO3102Q9H379 93 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 MGAT4CQ9UBM8 478 aa11.54□□□□□ -0.56
CAPN1-208ENST00000527323 ASXL3Q9C0F0 2248 aa11.53□□□□□ -0.56
CAPN1-208ENST00000527323 TRBV2A0A0J9YWF9 115 aa11.53□□□□□ -0.56
CAPN1-208ENST00000527323 C1QTNF3-AMACRE9PGA6 284 aa11.53□□□□□ -0.56
CAPN1-208ENST00000527323 MBTPS2O43462 519 aa11.53□□□□□ -0.56
CAPN1-208ENST00000527323 SERPINI2O75830 405 aa11.53□□□□□ -0.56
CAPN1-208ENST00000527323 AGR2O95994 175 aa11.53□□□□□ -0.56
CAPN1-208ENST00000527323 RRASP10301 218 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms