RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SETD7Q8WTS6 366 aaKnown RBP3.52□□□□□ -1.85
CSDE1-211ENST00000525970 C18orf12Q96KH6 178 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 OXGR1Q96P68 337 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 MBOAT4Q96T53 435 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 CNN2Q99439 309 aaKnown RBP3.52□□□□□ -1.85
CSDE1-211ENST00000525970 GLT8D2Q9H1C3 349 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 AUNIPQ9H7T9 357 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 NHEJ1Q9H9Q4 299 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-211ENST00000525970 DHRS4-AS1Q9P1J3 65 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 ARMCX1Q9P291 453 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 IKZF2Q9UKS7 526 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 PRSS21Q9Y6M0 314 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 PCNX3Q9H6A9 2034 aa3.52□□□□□ -1.85
CSDE1-211ENST00000525970 NINLQ9Y2I6 1382 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 A0A1B0GUS0 222 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 C9JVG2 144 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 E7ESA3 106 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 H7C423 109 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 GFYI3L273 518 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 DNAJB6O75190 326 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 ZNF253O75346 499 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 NOL4O94818 638 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 KBTBD11O94819 623 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 STAG3L3P0CL85 134 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 DPEP1P16444 411 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 OTX1P32242 354 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-211ENST00000525970 ELK3P41970 407 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 OR1G1P47890 313 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 KRTAP10-3P60369 221 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 IL18Q14116 193 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 SLC10A1Q14973 349 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 PPP1R7Q15435 360 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 GPRC6AQ5T6X5 926 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 OR2G6Q5TZ20 316 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 FAAP20Q6NZ36 180 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 ZNF343Q6P1L6 599 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 SLC25A48Q6ZT89 311 aaKnown RBP3.51□□□□□ -1.85
CSDE1-211ENST00000525970 SCD5Q86SK9 330 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 HPS6Q86YV9 775 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 CEP112Q8N8E3 955 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 BBOF1Q8ND07 529 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 SLC22A8Q8TCC7 542 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 TCTEX1D2Q8WW35 142 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 HTR3CQ8WXA8 447 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 PSMG2Q969U7 264 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 ZBED6CLQ96FA7 236 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-211ENST00000525970 SERAC1Q96JX3 654 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 PANX2Q96RD6 677 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 CLCC1Q96S66 551 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 RNF2Q99496 336 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 BCL7BQ9BQE9 202 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 BPIFA3Q9BQP9 254 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 TRIM51Q9BSJ1 452 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 ILKAPQ9H0C8 392 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-211ENST00000525970 GEMIN7Q9H840 131 aaKnown RBP3.51□□□□□ -1.85
CSDE1-211ENST00000525970 PANK3Q9H999 370 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 CUTCQ9NTM9 273 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 PSMC3IPQ9P2W1 217 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-211ENST00000525970 VANGL2Q9ULK5 521 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 STARD10Q9Y365 291 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 INSRP06213 1382 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 ANKRD30BQ9BXX2 1392 aa3.51□□□□□ -1.85
CSDE1-211ENST00000525970 CCT8L1PA6NM43 557 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 SHISA9B4DS77 424 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 E9PAM4 449 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 OR2F2O95006 317 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 C1orf105O95561 183 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 FTH1P02794 183 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 HOXD4P09016 255 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 VHLP40337 213 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 KIR2DS2P43631 304 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 RPL29P47914 159 aaKnown RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 RAB9AP51151 201 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 HMGCS2P54868 508 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 PAX2Q02962 417 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 TGIF1Q15583 401 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 CCDC137Q6PK04 289 aaKnown RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 TMCO2Q7Z6W1 182 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 OR56B4Q8NH76 319 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 ACMSDQ8TDX5 336 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 DNAJA4Q8WW22 397 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 SLC38A4Q969I6 547 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 HAVCR1Q96D42 359 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 CXorf40BQ96DE9 158 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 PLEKHA8Q96JA3 519 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 MCCC1Q96RQ3 725 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 RANBP9Q96S59 729 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 MAPKAP1Q9BPZ7 522 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 CENPKQ9BS16 269 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 CHIAQ9BZP6 476 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 TRIM15Q9C019 465 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 ELOVL4Q9GZR5 314 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 PPA2Q9H2U2 334 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 REEP4Q9H6H4 257 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 ZNF160Q9HCG1 818 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 RPRD1BQ9NQG5 326 aaKnown RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 STYXL1Q9Y6J8 313 aa3.5□□□□□ -1.85
CSDE1-211ENST00000525970 CFAP65Q6ZU64 1925 aaKnown RBP3.5□□□□□ -1.85
CSDE1-211ENST00000525970 CLSPNQ9HAW4 1339 aa3.49□□□□□ -1.85
CSDE1-211ENST00000525970 TRAV9-2A0A087WT02 112 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms