RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 STK11Q15831 433 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 LIN52Q52LA3 116 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 RNF220Q5VTB9 566 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF836Q6ZNA1 936 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 PEX5LQ8IYB4 626 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF440Q8IYI8 595 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 KBTBD8Q8NFY9 601 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 TMEM171Q8WVE6 324 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 HSD17B8Q92506 261 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 AKAP1Q92667 903 aaKnown RBP eCLIP8.35□□□□□ -1.07
SF3B2-204ENST00000525207 PMM1Q92871 262 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 FBXW5Q969U6 566 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 AURKBQ96GD4 344 aaPredicted RBP8.35□□□□□ -1.07
SF3B2-204ENST00000525207 C7orf26Q96N11 449 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 ESRP2Q9H6T0 727 aaKnown RBP8.35□□□□□ -1.07
SF3B2-204ENST00000525207 RMND5AQ9H871 391 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 TPT1P8Q9HAU6 139 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 NGBQ9NPG2 151 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF701Q9NV72 531 aaPredicted RBP8.35□□□□□ -1.07
SF3B2-204ENST00000525207 OSGIN1Q9UJX0 560 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 TMED7Q9Y3B3 224 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 USH1CQ9Y6N9 552 aa8.35□□□□□ -1.07
SF3B2-204ENST00000525207 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TMEM72A0PK05 275 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ZC3H12DA2A288 527 aaKnown RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 CDHR4A6H8M9 788 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 CFAP73A6NFT4 308 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TRIM64A6NGJ6 449 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TRIM64BA6NI03 449 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 OR5H1A6NKK0 313 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 C3orf80F5H4A9 247 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 H7C1Q1 480 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 GPR171O14626 319 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 UBDO15205 165 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 CLOCKO15516 846 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 RAD51DO75771 328 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ANP32DO95626 131 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 IGHV3-9P01782 118 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 HEXAP06865 529 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 CD3EP07766 207 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 HOXB9P17482 250 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TACR3P29371 465 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 SLC1A3P43003 542 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 MRPL19P49406 292 aaKnown RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 POLR2JP52435 117 aaKnown RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 RPS4XP62701 263 aaKnown RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 H3F3AP84243 136 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 BSPH1Q075Z2 132 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 PPA1Q15181 289 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF672Q499Z4 452 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 RPS26P11Q5JNZ5 115 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TIMM23BQ5SRD1 257 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 C6orf10Q5SRN2 563 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 AGBL2Q5U5Z8 902 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 FBXW9Q5XUX1 488 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 VRK2Q86Y07 508 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF100Q8IYN0 542 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 MIER2Q8N344 545 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 CIARTQ8N365 385 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF433Q8N7K0 673 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 LILRB1Q8NHL6 650 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 APH1AQ96BI3 265 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF775Q96BV0 537 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 DDIT4LQ96D03 193 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TMEM19Q96HH6 336 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ITCHQ96J02 903 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 MTHFD2LQ9H903 347 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 RLIMQ9NVW2 624 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 NPAP1Q9NZP6 1156 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 CALML5Q9NZT1 146 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TMEM181Q9P2C4 612 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 TRAPPC4Q9Y296 219 aa8.34□□□□□ -1.07
SF3B2-204ENST00000525207 ZNF443Q9Y2A4 671 aaPredicted RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 NOSIPQ9Y314 301 aaKnown RBP8.34□□□□□ -1.07
SF3B2-204ENST00000525207 FAM234BA2RU67 622 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 FAM171A2A8MVW0 826 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 POLR3GO15318 223 aaPredicted RBP8.33□□□□□ -1.08
SF3B2-204ENST00000525207 FRS3O43559 492 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 EIF1BO60739 113 aaKnown RBP8.33□□□□□ -1.08
SF3B2-204ENST00000525207 PGM3O95394 542 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 THBS1P07996 1170 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 SOD3P08294 240 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 TFPTP0C1Z6 253 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 DANCRP0C864 163 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 GKN3PP0CG01 181 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 IMPDH2P12268 514 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 CR1P17927 2039 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 GGT1P19440 569 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 CCNA2P20248 432 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 NTF4P34130 210 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 ACAA2P42765 397 aaKnown RBP8.33□□□□□ -1.08
SF3B2-204ENST00000525207 CRATP43155 626 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 MAP2K6P52564 334 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 OR2B6P58173 313 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 STX1BP61266 288 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 SLC35A1P78382 337 aa8.33□□□□□ -1.08
SF3B2-204ENST00000525207 LTBQ06643 244 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms