RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PKLRP30613 574 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 HNRNPH3P31942 346 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 HPDP32754 393 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 GCKP35557 465 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CD79BP40259 229 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 SULT1E1P49888 294 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ZNF136P52737 540 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ARFIP1P53367 373 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 EMP2P54851 167 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ADARP55265 1226 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 BPIFB3P59826 476 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 RPS3AP61247 264 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 IFI35P80217 286 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 MRPS11P82912 194 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 DEFA6Q01524 100 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ZNF33BQ06732 778 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 STK4Q13043 487 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 NME3Q13232 169 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 XRCC4Q13426 336 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ITIH4Q14624 930 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 MELKQ14680 651 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 FASTKD3Q14CZ7 662 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 HERC3Q15034 1050 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 GUSBP1Q15486 140 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 MED22Q15528 200 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 TSC22D1Q15714 1073 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 NDUFA9Q16795 377 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ZSWIM7Q19AV6 140 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PTPN20Q4JDL3 420 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CBWD6Q4V339 395 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 BOLA3Q53S33 107 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CBWD3Q5JTY5 395 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 VAX1Q5SQQ9 334 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CCDC183Q5T5S1 534 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 MARC1Q5VT66 337 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 MLIPQ5VWP3 458 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ACSM2BQ68CK6 577 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ZNF544Q6NX49 715 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 SHQ1Q6PI26 577 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 C11orf88Q6PI97 169 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CLEC2AQ6UVW9 174 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 LINC00696Q6ZRV3 163 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 FAM183BPQ6ZVS7 135 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ABHD13Q7L211 337 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 GALNTL5Q7Z4T8 443 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CPEB2Q7Z5Q1 589 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 HOOK3Q86VS8 718 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 RPS19BP1Q86WX3 136 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 HOGA1Q86XE5 327 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PHF13Q86YI8 300 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 FAM71AQ8IYT1 594 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 WDTC1Q8N5D0 677 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 C3orf56Q8N813 242 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 LINC00301Q8NCQ3 95 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CATSPER1Q8NEC5 780 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR52E1Q8NGJ3 308 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR10G8Q8NGN5 311 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR6K2Q8NGY2 324 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR2L8Q8NGY9 312 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 NEIL3Q8TAT5 605 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 NUBPLQ8TB37 319 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PAQR8Q8TEZ7 354 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 GATAD1Q8WUU5 269 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 LCN9Q8WX39 176 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 NRGNQ92686 78 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 SYN2Q92777 582 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 N4BP2L2Q92802 583 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 MRPL24Q96A35 216 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 EPSTI1Q96J88 318 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 TTC25Q96NG3 672 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 GSDMAQ96QA5 445 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 TRIB3Q96RU7 358 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 DDOQ99489 341 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 VAT1Q99536 393 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 EBNA1BP2Q99848 306 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 RIOK2Q9BVS4 552 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 SUCNR1Q9BXA5 334 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 DGCR6LQ9BY27 220 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 TTTY12Q9BZ98 90 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 UCK2Q9BZX2 261 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 DRC3Q9H069 523 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 OR2AG1Q9H205 316 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 UBQLN3Q9H347 655 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 LIME1Q9H400 295 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 SYNCQ9H7C4 482 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 NGBQ9NPG2 151 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 MAN2C1Q9NTJ4 1040 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 EXOC1Q9NV70 894 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 CNIH4Q9P003 139 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 DHCR7Q9UBM7 475 aaKnown RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 MOSPD1Q9UJG1 213 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PRDM4Q9UKN5 801 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 BOKQ9UMX3 212 aaPredicted RBP1.28□□□□□ -2.2
CD44-212ENST00000524922 NENFQ9UMX5 172 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 MGAT4BQ9UQ53 548 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PPP1R3CQ9UQK1 317 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 KCNK6Q9Y257 313 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 PPP2R2CQ9Y2T4 447 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 ZNF175Q9Y473 711 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms