RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 NPDC1Q9NQX5 325 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-225ENST00000523950 CMTM6Q9NX76 183 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 NDE1Q9NXR1 346 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 TMEM181Q9P2C4 612 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 KLHL9Q9P2J3 617 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 ABCD2Q9UBJ2 740 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 RPS6KB2Q9UBS0 482 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 TAGLN3Q9UI15 199 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 BAG5Q9UL15 447 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 TMEM72A0PK05 275 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 A8MVM7 634 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 A8MXE2 369 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 C19orf84I3L1E1 186 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 EEF1E1O43324 174 aaKnown RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 FRS3O43559 492 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 EIF1BO60739 113 aaKnown RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 CYTIPO60759 359 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 DNAJC8O75937 253 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 PRKD3O94806 890 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 PNMTP11086 282 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 COL8A1P27658 744 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 KIR2DL2P43627 348 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 MNAT1P51948 309 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SLC7A2P52569 658 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SLC35A1P78382 337 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SORDQ00796 357 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 MYBPHQ13203 477 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SPTAN1Q13813 2472 aaKnown RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 KRT72Q14CN4 511 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 PDK3Q15120 406 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 NRF1Q16656 503 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 DUSP7Q16829 419 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 ULK3Q6PHR2 472 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 KIF18BQ86Y91 864 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 CNEP1R1Q8N9A8 125 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SMYD1Q8NB12 490 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 GPR32P1Q8NGA4 272 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 STK35Q8TDR2 534 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 TAMM41Q96BW9 452 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 STARD4Q96DR4 205 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 RSPO3Q9BXY4 272 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-225ENST00000523950 ALG2Q9H553 416 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 TMEM27Q9HBJ8 222 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SPAG4Q9NPE6 437 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SELENONQ9NZV5 590 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 KLHL13Q9P2N7 655 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 PROCRQ9UNN8 238 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 SLC9A8Q9Y2E8 581 aa11.22□□□□□ -0.61
VEGFA-225ENST00000523950 CCT8L1PA6NM43 557 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 TMEM229AB2RXF0 380 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 NME4O00746 187 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 OPN1SWP03999 348 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 FESP07332 822 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 CCNA2P20248 432 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 CD247P20963 164 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 HTR2AP28223 471 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 KDELR2P33947 212 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 IDUAP35475 653 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 CPA2P48052 419 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 AGFG1P52594 562 aaKnown RBP11.21□□□□□ -0.61
VEGFA-225ENST00000523950 PSME3P61289 254 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 SIRPAP78324 504 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 LIPEQ05469 1076 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 ALG10BQ5I7T1 473 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 TMEM201Q5SNT2 666 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 ABLIM2Q6H8Q1 611 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 VWA1Q6PCB0 445 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 ZNF613Q6PF04 617 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 MEX3BQ6ZN04 569 aaKnown RBP11.21□□□□□ -0.61
VEGFA-225ENST00000523950 COMTD1Q86VU5 262 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 DMRTC2Q8IXT2 367 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-225ENST00000523950 PIGXQ8TBF5 258 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 ROBO4Q8WZ75 1007 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 PROX1Q92786 737 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 SLC47A1Q96FL8 570 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 ARL5BQ96KC2 179 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 NAA11Q9BSU3 229 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-225ENST00000523950 RBM24Q9BX46 236 aaKnown RBP11.21□□□□□ -0.61
VEGFA-225ENST00000523950 OR11A1Q9GZK7 315 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 POLR2J2Q9GZM3 115 aaKnown RBP11.21□□□□□ -0.61
VEGFA-225ENST00000523950 PCDHAC1Q9H158 963 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 POLR2J3Q9H1A7 115 aaKnown RBP11.21□□□□□ -0.61
VEGFA-225ENST00000523950 BCO1Q9HAY6 547 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 FANCFQ9NPI8 374 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 PLSCR4Q9NRQ2 329 aa11.21□□□□□ -0.61
VEGFA-225ENST00000523950 COL12A1Q99715 3063 aa11.21□□□□□ -0.62
VEGFA-225ENST00000523950 ASH1LQ9NR48 2969 aaKnown RBP11.21□□□□□ -0.62
VEGFA-225ENST00000523950 A0A0B4J2E0 115 aa11.2□□□□□ -0.62
VEGFA-225ENST00000523950 A0A1B0GWA3 101 aa11.2□□□□□ -0.62
VEGFA-225ENST00000523950 A0A1B0GX12 115 aa11.2□□□□□ -0.62
VEGFA-225ENST00000523950 ELOA3DA6NLF2 546 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-225ENST00000523950 ZNF724A8MTY0 619 aa11.2□□□□□ -0.62
VEGFA-225ENST00000523950 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
VEGFA-225ENST00000523950 NPIPB7O75200 414 aa11.2□□□□□ -0.62
VEGFA-225ENST00000523950 SMNDC1O75940 238 aaKnown RBP eCLIP11.2□□□□□ -0.624e-7■■□□□ 12.8
VEGFA-225ENST00000523950 CGAP01215 116 aa11.2□□□□□ -0.62
VEGFA-225ENST00000523950 GPIP06744 558 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms