RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 IDSB3KWA1 339 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ACOT7O00154 380 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR8G3PP0DMU2 310 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 HTR3AP46098 478 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 Q6ZNX1 250 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 CLEC1AQ8NC01 280 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR13F1Q8NGS4 319 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 STT3BQ8TCJ2 826 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 NPRL2Q8WTW4 380 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 CASTOR1Q8WTX7 329 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 COX14Q96I36 57 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF578Q96N58 590 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 STACQ99469 402 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 TTYH1Q9H313 450 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 TRPV4Q9HBA0 871 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 POMT2Q9UKY4 750 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 PADI1Q9ULC6 663 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ISPDA4D126 451 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 GJE1A6NN92 205 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 FPR3P25089 353 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC1A3P43003 542 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 MAGEA2P43356 314 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 CAV3P56539 151 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 RAE1P78406 368 aaKnown RBP12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 CNIH2Q6PI25 160 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 ADGRF3Q8IZF5 1079 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 PFN4Q8NHR9 129 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 GPR148Q8TDV2 347 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 NLKQ9UBE8 527 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 NOP16Q9Y3C1 178 aaKnown RBP12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 CEP250Q9BV73 2442 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 BRCA1P38398 1863 aaKnown RBP12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 SYT7O43581 403 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 CTSVO60911 334 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 EPHA2P29317 976 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 ARPC4P59998 168 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 FOXK2Q01167 660 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 TFF2Q03403 129 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 RIMKLAQ8IXN7 391 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 IRF2BPLQ9H1B7 796 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 FN3KQ9H479 309 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 PRDM7Q9NQW5 492 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 SPTBP11277 2137 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMEM72A0PK05 275 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 CENPBD1B2RD01 187 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 FXYD6P3P58550 94 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 CTU2Q2VPK5 515 aaKnown RBP12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC35D2Q76EJ3 337 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 MBOAT4Q96T53 435 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 GABRG3Q99928 467 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 EVA1AQ9H8M9 152 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 ANKRD10Q9NXR5 420 aa12.09□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMED7-TICAM2A0A0A6YYA0 188 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 TCN2P20062 427 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 S100A1P23297 94 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 ART1P52961 327 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 WNT3P56703 355 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 CPNE2Q96FN4 548 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 TP63Q9H3D4 680 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 SCP2D1Q9UJQ7 156 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC6A14Q9UN76 642 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 TMED7Q9Y3B3 224 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 PCM1Q15154 2024 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 A0A0A6YYD5 115 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 LRRTM2O43300 516 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 GREM1O60565 184 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 CELA2BP08218 269 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 CSNK1A1P48729 337 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 ARG2P78540 354 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 PRKCDQ05655 676 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 MAB21L1Q13394 359 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 FZD2Q14332 565 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 RAB11BQ15907 218 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 TMPPEQ6ZT21 453 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 Q7L0L9 218 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 FOXRED2Q8IWF2 684 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF511Q8NB15 262 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 C16orf52Q8NHV5 167 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 C8orf44Q96CB5 159 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR2A14Q96R47 310 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 PLEK2Q9NYT0 353 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 CLEC2DQ9UHP7 191 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 YKT6O15498 198 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 CHP2O43745 196 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 KCNK2O95069 426 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 MAKP20794 623 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 STOMP27105 288 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 NTRK2Q16620 822 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 ARHGAP11BQ3KRB8 267 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 TBRG1Q3YBR2 411 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 FBXO42Q6P3S6 717 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 XKRXQ6PP77 449 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 SERPINA12Q8IW75 414 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 UBALD2Q8IYN6 164 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR7G1Q8NGA0 311 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 MAFAQ8NHW3 353 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 Q96M85 177 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 ALG12Q9BV10 488 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 CACNG6Q9BXT2 260 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms