RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 CFAP73A6NFT4 308 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 FESP07332 822 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 ARAFP10398 606 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TFPIP10646 304 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 EDNRAP25101 427 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TACR3P29371 465 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 UGT2B10P36537 528 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 APOBEC1P41238 236 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 ACAA2P42765 397 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 RAC3P60763 192 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 SELPLGQ14242 412 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 GNA13Q14344 377 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 RNF220Q5VTB9 566 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 DHDDSQ86SQ9 333 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 COMTD1Q86VU5 262 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 ZNF775Q96BV0 537 aaPredicted RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 REXO5Q96IC2 774 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 ZNF300Q96RE9 604 aaPredicted RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 PSD2Q9BQI7 771 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TIGARQ9NQ88 270 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 SERINC1Q9NRX5 453 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 OSGIN1Q9UJX0 560 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 RAI1Q7Z5J4 1906 aaPredicted RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 TMED7-TICAM2A0A0A6YYA0 188 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 A0A0G2JPF8 293 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TMEM72A0PK05 275 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 ZC3H12DA2A288 527 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 HNRNPCL2B2RXH8 293 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 ZNF814B7Z6K7 855 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 HNRNPCL3B7ZW38 293 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 SULT2B1O00204 365 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 HNRNPCL1O60812 293 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 PGM3O95394 542 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 THBS1P07996 1170 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 HNRNPCL4P0DMR1 293 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 MTPNP58546 118 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 HOXC5Q00444 222 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 CAPRIN1Q14444 709 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 RNPS1Q15287 305 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TMPPEQ6ZT21 453 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 SERPINA11Q86U17 422 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 SLC25A43Q8WUT9 341 aaPredicted RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 PMM1Q92871 262 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 PIGTQ969N2 578 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 ZC3HAV1LQ96H79 300 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 SIKE1Q9BRV8 207 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 RAD21L1Q9H4I0 556 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 RABEP2Q9H5N1 569 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 BCL2L10Q9HD36 194 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 GLRX2Q9NS18 164 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TMEM45AQ9NWC5 275 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 THUMPD1Q9NXG2 353 aaKnown RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 C6orf203Q9P0P8 240 aaPredicted RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 LEF1Q9UJU2 399 aaPredicted RBP13.39□□□□□ -0.27
PCM1-218ENST00000523055 TMED7Q9Y3B3 224 aa13.39□□□□□ -0.27
PCM1-218ENST00000523055 TMEM247A6NEH6 219 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 RAMP1O60894 148 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 PRKD3O94806 890 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 VIMP08670 466 aaKnown RBP13.38□□□□□ -0.27
PCM1-218ENST00000523055 PABPC4LP0CB38 370 aaKnown RBP13.38□□□□□ -0.27
PCM1-218ENST00000523055 AQP1P29972 269 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 SLC1A3P43003 542 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 IRX1P78414 480 aaPredicted RBP13.38□□□□□ -0.27
PCM1-218ENST00000523055 LARS2Q15031 903 aaKnown RBP13.38□□□□□ -0.27
PCM1-218ENST00000523055 TSC22D1Q15714 1073 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 ADRM1Q16186 407 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 GLIPR1L2Q4G1C9 344 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 ZNF311Q5JNZ3 666 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 TMEM201Q5SNT2 666 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 TFAP2EQ6VUC0 442 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 STAC2Q6ZMT1 411 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 CADM2Q8N3J6 435 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 BBS10Q8TAM1 723 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 PERPQ96FX8 193 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 SLC39A3Q9BRY0 314 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 ELOVL5Q9NYP7 299 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 NDUFAF1Q9Y375 327 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 GMEB1Q9Y692 573 aa13.38□□□□□ -0.27
PCM1-218ENST00000523055 CADP27708 2225 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 C5orf58C9J3I9 102 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 C16orf97H3BN30 126 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 FAAHO00519 579 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 FBP2O00757 339 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 ANGPT2O15123 496 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 CYTIPO60759 359 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 CNOT4O95628 575 aaKnown RBP13.37□□□□□ -0.27
PCM1-218ENST00000523055 TROVE2P10155 538 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCM1-218ENST00000523055 IMPDH2P12268 514 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 GPX2P18283 190 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 POLR2HP52434 150 aaKnown RBP13.37□□□□□ -0.27
PCM1-218ENST00000523055 CDK6Q00534 326 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 RASGEF1BQ0VAM2 473 aa13.37□□□□□ -0.27
PCM1-218ENST00000523055 BNIP2Q12982 314 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms