RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RGMAQ96B86 450 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 INTS12Q96CB8 462 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 PLPPR2Q96GM1 343 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 WDYHV1Q96HA8 205 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 TPD52L3Q96J77 140 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 HS6ST2Q96MM7 605 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 NPLQ9BXD5 320 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 PITHD1Q9GZP4 211 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 GABARAPL1Q9H0R8 117 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 PIGMQ9H3S5 423 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 KLHL31Q9H511 634 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 CXorf36Q9H7Y0 433 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 BARX1Q9HBU1 254 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 PAPOLBQ9NRJ5 636 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 HPF1Q9NWY4 346 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 TAS2R9Q9NYW1 312 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 FAF1Q9UNN5 650 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 B3GALT5Q9Y2C3 310 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 YARS2Q9Y2Z4 477 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 COMMD3-BMI1R4GMX3 469 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 A0A0A6YYD5 115 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 LOC100130705A0A1B0GUX0 176 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 PRAMEF25A6NGN4 478 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SGK494L7N484 410 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 M0QX08 132 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 HAT1O14929 419 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SLC16A6O15403 523 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 B4GALT2O60909 372 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 CLEC3AO75596 197 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 OR2J2O76002 312 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 NSA2O95478 260 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 KRT75O95678 551 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 TGFAP01135 160 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 OPN1SWP03999 348 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SERPIND1P05546 499 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 IL7RP16871 459 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 TNFRSF1BP20333 461 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 DDCP20711 480 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 UQCRC2P22695 453 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 AQP1P29972 269 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SERPINB1P30740 379 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SOAT1P35610 550 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 CHI3L1P36222 383 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SRP14P37108 136 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 BCL6P41182 706 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 ALDH9A1P49189 494 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 CLK3P49761 638 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 CDK9P50750 372 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 GPR143P51810 404 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 MAPK12P53778 367 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 HILS1P60008 231 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SELENOWP63302 87 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 CD47Q08722 323 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 RBBP4Q09028 425 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 HYAL2Q12891 473 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 EPS8Q12929 822 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 PMS2P3Q13401 168 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SCARB2Q14108 478 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 ZBED5Q49AG3 693 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 TOR1AIP1Q5JTV8 583 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 RBM48Q5RL73 367 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 C6orf141Q5SZD1 244 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 ZNF691Q5VV52 312 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 KDM4DQ6B0I6 523 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 OR4C11Q6IEV9 310 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 ZNF793Q6ZN11 406 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 CCDC80Q76M96 950 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 GALNT5Q7Z7M9 940 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 ADGRE4PQ86SQ3 457 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 RNF130Q86XS8 419 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 GPALPP1Q8IXQ4 340 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 C8orf59Q8N0T1 100 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 GCNT2Q8N0V5 402 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 RAB42Q8N4Z0 105 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 OR5P2Q8WZ92 322 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SGCDQ92629 289 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 HTRA1Q92743 480 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 HDAC2Q92769 488 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 PROX1Q92786 737 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 EXOSC8Q96B26 276 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 TAMM41Q96BW9 452 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 STARD4Q96DR4 205 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 NRBF2Q96F24 287 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 MPP4Q96JB8 637 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 MACROD1Q9BQ69 325 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 DOHHQ9BU89 302 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 TRAF4Q9BUZ4 470 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 DDX31Q9H8H2 851 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 MRPS30Q9NP92 439 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 SIRT3Q9NTG7 399 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 TMEM184CQ9NVA4 438 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 EXD2Q9NVH0 621 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 ADPRHL2Q9NX46 363 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 TEX10Q9NXF1 929 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 PDP1Q9P0J1 537 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 ADAM29Q9UKF5 820 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 FBXW2Q9UKT8 454 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 CAMK2AQ9UQM7 478 aa6.51□□□□□ -1.37
CTNNA1-227ENST00000521387 LRIT2A6NDA9 550 aa6.5□□□□□ -1.37
CTNNA1-227ENST00000521387 WASHC1A8K0Z3 465 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms