RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 H3F3AP84243 136 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 DMTNQ08495 405 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 BST1Q10588 318 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 TMEM108Q6UXF1 575 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 LRRC74BQ6ZQY2 392 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 OR52N5Q8NH56 324 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 HS6ST2Q96MM7 605 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 MDFIQ99750 246 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 INPP5KQ9BT40 448 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 PARD6BQ9BYG5 372 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 CENPHQ9H3R5 247 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 BARX1Q9HBU1 254 aaPredicted RBP17.3■□□□□ 0.36
PABPC1-215ENST00000520804 KCNK9Q9NPC2 374 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 TAS2R16Q9NYV7 291 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 MALT1Q9UDY8 824 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 GDF2Q9UK05 429 aaPredicted RBP17.3■□□□□ 0.36
PABPC1-215ENST00000520804 ADAM21Q9UKJ8 722 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 TMED7Q9Y3B3 224 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 SLC25A15Q9Y619 301 aa17.3■□□□□ 0.36
PABPC1-215ENST00000520804 CCT8L1PA6NM43 557 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 SDHDO14521 159 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 ZNF208O43345 1280 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 CRLF1O75462 422 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 PGRP06401 933 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 RPS4Y1P22090 263 aaKnown RBP17.29■□□□□ 0.36
PABPC1-215ENST00000520804 IL12AP29459 219 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 CDKN2CP42773 168 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 ANXA11P50995 505 aaKnown RBP17.29■□□□□ 0.36
PABPC1-215ENST00000520804 POLR2HP52434 150 aaKnown RBP17.29■□□□□ 0.36
PABPC1-215ENST00000520804 CEP85LQ5SZL2 805 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 AGAP6Q5VW22 663 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 SPATA19Q7Z5L4 167 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
PABPC1-215ENST00000520804 PMM1Q92871 262 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 DDIT4LQ96D03 193 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 MUS81Q96NY9 551 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 OR52E6Q96RD3 313 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 MTHFD2LQ9H903 347 aaPredicted RBP17.29■□□□□ 0.36
PABPC1-215ENST00000520804 OSGIN1Q9UJX0 560 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 MGAT4BQ9UQ53 548 aa17.29■□□□□ 0.36
PABPC1-215ENST00000520804 CR1P17927 2039 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 TMEM72A0PK05 275 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 FAAHO00519 579 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 EIF1BO60739 113 aaKnown RBP17.28■□□□□ 0.36
PABPC1-215ENST00000520804 GSNP06396 782 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 IMPDH2P12268 514 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 PTAFRP25105 342 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 TACR3P29371 465 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 ZNF83P51522 516 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 SLC35A1P78382 337 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 LRRC74AQ0VAA2 488 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 GNA13Q14344 377 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 GABRA6Q16445 453 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 OR7E24Q6IFN5 339 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 KLHL17Q6TDP4 642 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 ZNF621Q6ZSS3 439 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 WDR60Q8WVS4 1066 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 PAIP2Q9BPZ3 127 aaKnown RBP17.28■□□□□ 0.36
PABPC1-215ENST00000520804 NAA11Q9BSU3 229 aaPredicted RBP17.28■□□□□ 0.36
PABPC1-215ENST00000520804 B3GALT5Q9Y2C3 310 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 GPR45Q9Y5Y3 372 aa17.28■□□□□ 0.36
PABPC1-215ENST00000520804 A0A1W2PR80 420 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 E7EQL1 145 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 PDLIM1O00151 329 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 DBIP07108 87 aaKnown RBP17.27■□□□□ 0.36
PABPC1-215ENST00000520804 ITGA5P08648 1049 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 NR2F1P10589 423 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 IL7RP16871 459 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 PTNP21246 168 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 CD40P25942 277 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 SLC1A3P43003 542 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 MAP2K6P52564 334 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 FOXG1P55316 489 aaPredicted RBP17.27■□□□□ 0.36
PABPC1-215ENST00000520804 SPOCK1Q08629 439 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 NRF1Q16656 503 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 COX20Q5RI15 118 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 MRPL2Q5T653 305 aaKnown RBP17.27■□□□□ 0.36
PABPC1-215ENST00000520804 SLC22A25Q6T423 547 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 CASP12Q6UXS9 341 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 LSRQ86X29 649 aaPredicted RBP17.27■□□□□ 0.36
PABPC1-215ENST00000520804 OR52E4Q8NGH9 312 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 PNPT1Q8TCS8 783 aaKnown RBP17.27■□□□□ 0.36
PABPC1-215ENST00000520804 ZBTB18Q99592 522 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 PARPBPQ9NWS1 579 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 SLC9A8Q9Y2E8 581 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 FLVCR1Q9Y5Y0 555 aa17.27■□□□□ 0.36
PABPC1-215ENST00000520804 ZC3H12DA2A288 527 aaKnown RBP17.26■□□□□ 0.35
PABPC1-215ENST00000520804 CFAP73A6NFT4 308 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 TP53P04637 393 aaPredicted RBP17.26■□□□□ 0.35
PABPC1-215ENST00000520804 UQCRBP14927 111 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 TTKP33981 857 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 EPS8Q12929 822 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 SLC17A1Q14916 467 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 HHATQ5VTY9 493 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 C11orf71Q6IPW1 123 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 GLB1L3Q8NCI6 653 aaPredicted RBP17.26■□□□□ 0.35
PABPC1-215ENST00000520804 ZBTB9Q96C00 473 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 DHRS9Q9BPW9 319 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 AMBRA1Q9C0C7 1298 aa17.26■□□□□ 0.35
PABPC1-215ENST00000520804 ADAM19Q9H013 955 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms