RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 A8MU10 97 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 KLLNB2CW77 178 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 G3V3Y1 287 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 SLC17A2O00624 439 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 GPAA1O43292 621 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 ZNF208O43345 1280 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 RAMP1O60894 148 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 VPS26AO75436 327 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CBR3O75828 277 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 DUSP14O95147 198 aaKnown RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 NDUFA7O95182 113 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 GIG44P09565 113 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 UBTFL1P0CB47 393 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 MCF2P10911 925 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CCNOP22674 350 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 PSMA2P25787 234 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 HTR2AP28223 471 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 HOXA6P31267 233 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 MDH2P40926 338 aaKnown RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 OR1D4P47884 311 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 HSPA13P48723 471 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CRYBB1P53674 252 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 RAG2P55895 527 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CLDN8P56748 225 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 RGS8P57771 180 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 MYL6P60660 151 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 RAB14P61106 215 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CXCL6P80162 114 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 HSF2Q03933 536 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 FADDQ13158 208 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 IQGAP2Q13576 1575 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 TGIF1Q15583 401 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 EXOC3L2Q2M3D2 409 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 ZNF829Q3KNS6 432 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 TTMPQ5BVD1 217 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 LGSNQ5TDP6 509 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 PLCXD3Q63HM9 321 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 SPECC1LQ69YQ0 1117 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 LRRC8BQ6P9F7 803 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CD109Q6YHK3 1445 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 NET1Q7Z628 596 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 KIF27Q86VH2 1401 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 GRAMD2AQ8IUY3 354 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 KATNAL2Q8IYT4 538 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 MICU2Q8IYU8 434 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CENPSQ8N2Z9 138 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 ZNF525Q8N782 197 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 RNF148Q8N7C7 305 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 ANKFN1Q8N957 763 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 STKLD1Q8NE28 680 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 OR52B4Q8NGK2 314 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CCDC26Q8TAB7 109 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 RFESDQ8TAC1 157 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 TRMT10AQ8TBZ6 339 aaKnown RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 TNFRSF14Q92956 283 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 SLC25A36Q96CQ1 311 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 DNAJA3Q96EY1 480 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 SLC41A3Q96GZ6 507 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 SNF8Q96H20 258 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 PRRC1Q96M27 445 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 NUP58Q9BVL2 599 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 HCAR1Q9BXC0 346 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 OPN3Q9H1Y3 402 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 OR52A5Q9H2C5 316 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 TMEM231Q9H6L2 316 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 WDR76Q9H967 626 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 NT5MQ9NPB1 228 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 EXOSC3Q9NQT5 275 aaKnown RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 PNO1Q9NRX1 252 aaKnown RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 KLRF1Q9NZS2 232 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 DPM3Q9P2X0 92 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 Q9UF83 564 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 CYTH4Q9UIA0 394 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 IFT52Q9Y366 437 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 KIF25-AS1Q9Y6Z4 181 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 TP53BP1Q12888 1972 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 ZNF142P52746 1687 aaPredicted RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 MAGI3Q5TCQ9 1506 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 IQSEC2Q5JU85 1478 aa2.71□□□□□ -1.97
VPS13B-207ENST00000518569 TTC21AQ8NDW8 1320 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 YEATS2Q9ULM3 1422 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 SMIM23A6NLE4 172 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 IQCF5A8MTL0 148 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 PDZK1P1A8MUH7 402 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 GOLGA8TH3BQL2 631 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 H3BQV1 296 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 GOLGA8MH3BSY2 632 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 H3BTX0 84 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 IMPA2O14732 288 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 HDAC3O15379 428 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 UFL1O94874 794 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 HLA-DRAP01903 254 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 MBP02144 154 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 ALOX5P09917 674 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 OR8G3PP0DMU2 310 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 DBTP11182 482 aaKnown RBP2.71□□□□□ -1.98
VPS13B-207ENST00000518569 MX1P20591 662 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 DRD5P21918 477 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 GDF1P27539 372 aa2.71□□□□□ -1.98
VPS13B-207ENST00000518569 AKT2P31751 481 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms