RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 AKR7A3O95154 331 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 PLAUP00749 431 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 ARAFP10398 606 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 BMP2P12643 396 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 CRYGSP22914 178 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 DNASE1P24855 282 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 CXCR1P25024 350 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 ADSLP30566 484 aaPredicted RBP10.19□□□□□ -0.78
VCAN-212ENST00000515397 MAGEA8P43361 318 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 HTR3AP46098 478 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 ARFIP2P53365 341 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 FOXG1P55316 489 aaPredicted RBP10.19□□□□□ -0.78
VCAN-212ENST00000515397 COPZ1P61923 177 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 FADDQ13158 208 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 NFYCQ13952 458 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 CEACAM7Q14002 265 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 SCARB2Q14108 478 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 KEAP1Q14145 624 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 OR7A5Q15622 319 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 REEP3Q6NUK4 255 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 ATG4DQ86TL0 474 aaPredicted RBP10.19□□□□□ -0.78
VCAN-212ENST00000515397 ZNF100Q8IYN0 542 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 GABRG1Q8N1C3 465 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 SMYD1Q8NB12 490 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 BBS10Q8TAM1 723 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 SLC25A43Q8WUT9 341 aaPredicted RBP10.19□□□□□ -0.78
VCAN-212ENST00000515397 OIT3Q8WWZ8 545 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 PMM1Q92871 262 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 DDIT4LQ96D03 193 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 CGREF1Q99674 301 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 RAD21L1Q9H4I0 556 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 RABEP2Q9H5N1 569 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 UBTD1Q9HAC8 227 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 BCO1Q9HAY6 547 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 CACYBPQ9HB71 228 aaKnown RBP10.19□□□□□ -0.78
VCAN-212ENST00000515397 BCL2L10Q9HD36 194 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 THUMPD1Q9NXG2 353 aaKnown RBP10.19□□□□□ -0.78
VCAN-212ENST00000515397 ZNF226Q9NYT6 803 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 TMEM181Q9P2C4 612 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 TRIM33Q9UPN9 1127 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 IFT52Q9Y366 437 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 HDGFL3Q9Y3E1 203 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 LOC100653049A0A140TA62 436 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 ZNF716A6NP11 495 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 ANGPT2O15123 496 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 KRT34O76011 436 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 ATE1O95260 518 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 PMS2P2O95744 297 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 OPN1SWP03999 348 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 THBS1P07996 1170 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 GPX2P18283 190 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 CBLP22681 906 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 SLC6A2P23975 617 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 LOXP28300 417 aaPredicted RBP10.18□□□□□ -0.78
VCAN-212ENST00000515397 OR3A2P47893 321 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 SFRP5Q5T4F7 317 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 RNF220Q5VTB9 566 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 C9orf135Q5VTT2 229 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 WBP2NLQ6ICG8 309 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 GALNT5Q7Z7M9 940 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 PTOV1Q86YD1 416 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 ZNF440Q8IYI8 595 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 UBE2J2Q8N2K1 259 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 TMEM99Q8N816 258 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 RNF217Q8TC41 542 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 C3orf49Q96BT1 292 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 ANKRD27Q96NW4 1050 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 ADPRHL2Q9NX46 363 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 USP22Q9UPT9 525 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 GPR52Q9Y2T5 361 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 NOSIPQ9Y314 301 aaKnown RBP10.18□□□□□ -0.78
VCAN-212ENST00000515397 CADP27708 2225 aa10.18□□□□□ -0.78
VCAN-212ENST00000515397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 A0A1W2PR80 420 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 ZNF724A8MTY0 619 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 M0QX08 132 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 FAAHO00519 579 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 ZNF208O43345 1280 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 TROVE2P10155 538 aaKnown RBP eCLIP10.17□□□□□ -0.78
VCAN-212ENST00000515397 UQCRBP14927 111 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 PSMB1P20618 241 aaKnown RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 PPIBP23284 216 aaKnown RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 IL32P24001 234 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 HTR2AP28223 471 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 CLK1P49759 484 aaKnown RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 SLC35A1P78382 337 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 DMTNQ08495 405 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 KLF10Q13118 480 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 TAB1Q15750 504 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 STK11Q15831 433 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 CYP51A1Q16850 503 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 HSP90B2PQ58FF3 399 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 RABL3Q5HYI8 236 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 OTUD3Q5T2D3 398 aaPredicted RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 ABLIM2Q6H8Q1 611 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 PAMR1Q6UXH9 720 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 BHLHA15Q7RTS1 189 aaPredicted RBP10.17□□□□□ -0.78
VCAN-212ENST00000515397 KDM8Q8N371 416 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 DPP10Q8N608 796 aa10.17□□□□□ -0.78
VCAN-212ENST00000515397 OR52E4Q8NGH9 312 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms