RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ATP6V1C2Q8NEY4 427 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 STK35Q8TDR2 534 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 PYDC1Q8WXC3 89 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 SLCO4A1Q96BD0 722 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 C3orf49Q96BT1 292 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 SNRNP40Q96DI7 357 aaKnown RBP9.17□□□□□ -0.94
NEDD9-214ENST00000513989 POTEKPQ9BYX7 375 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 SLC19A3Q9BZV2 496 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 KLHL4Q9C0H6 718 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 CTPS2Q9NRF8 586 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 PAQR5Q9NXK6 330 aaPredicted RBP9.17□□□□□ -0.94
NEDD9-214ENST00000513989 SLC7A7Q9UM01 511 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 A4GNTQ9UNA3 340 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 NTNG1Q9Y2I2 539 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 SLC6A5Q9Y345 797 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 MED31Q9Y3C7 131 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 ZNF337Q9Y3M9 751 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 SAMHD1Q9Y3Z3 626 aaKnown RBP9.17□□□□□ -0.94
NEDD9-214ENST00000513989 TESMINQ9Y4I5 508 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 PCNX1Q96RV3 2341 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 CPAMD8Q8IZJ3 1885 aa9.17□□□□□ -0.94
NEDD9-214ENST00000513989 H3BML4 177 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 J3KTA2 159 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 BCKDKO14874 412 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 OR2T1O43869 369 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TIPRLO75663 272 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 DIRAS1O95057 198 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 MT-ND1P03886 318 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 HIST1H2ABP04908 130 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 CELA3AP09093 270 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 EDN3P14138 238 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 DNAJA1P31689 397 aaKnown RBP9.16□□□□□ -0.94
NEDD9-214ENST00000513989 HMGA2P52926 109 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 GFRA1P56159 465 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 CARD18P57730 90 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 RPS3AP61247 264 aaKnown RBP9.16□□□□□ -0.94
NEDD9-214ENST00000513989 CSNK2A1P68400 391 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-214ENST00000513989 MFSD13AQ14CX5 517 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TAF11Q15544 211 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 ATP6AP1Q15904 470 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TMEM176BQ3YBM2 270 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-214ENST00000513989 FGD3Q5JSP0 725 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 WLSQ5T9L3 541 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 VASNQ6EMK4 673 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 LINC00114Q6XXX2 140 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 ESPNLQ6ZVH7 1005 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 HIST3H2AQ7L7L0 130 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 ATCAYQ86WG3 371 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 SIAH3Q8IW03 269 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 C10orf53Q8N6V4 93 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 OR5M1Q8NGP8 315 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 OR52J3Q8NH60 311 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 POC1BQ8TC44 478 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TMEM239Q8WW34 195 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 ACOT11Q8WXI4 607 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-214ENST00000513989 HIST1H2ACQ93077 130 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 SDCCAG3Q96C92 435 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 NRBF2Q96F24 287 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 CENPNQ96H22 339 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-214ENST00000513989 ALPK1Q96QP1 1244 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TMEM43Q9BTV4 400 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TAPBPLQ9BX59 468 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TSPAN10Q9H1Z9 355 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-214ENST00000513989 SLC6A15Q9H2J7 730 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 DCLRE1BQ9H816 532 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 RHCGQ9UBD6 479 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TRAPPC4Q9Y296 219 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 HDGFL3Q9Y3E1 203 aa9.16□□□□□ -0.94
NEDD9-214ENST00000513989 TRAV36DV7A0A075B6V5 113 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 B4DXG7 233 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 SHISA8B8ZZ34 492 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 FFAR1O14842 300 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 AHSA1O95433 338 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 HOXD4P09016 255 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-214ENST00000513989 CPN1P15169 458 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 BMP7P18075 431 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 GTF2E2P29084 291 aaKnown RBP9.15□□□□□ -0.94
NEDD9-214ENST00000513989 SFTPDP35247 375 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 PTGS2P35354 604 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 CASP6P55212 293 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 NUP107P57740 925 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 B3GALT5-AS1P59052 145 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 MRPL49Q13405 166 aaKnown RBP9.15□□□□□ -0.94
NEDD9-214ENST00000513989 SGCBQ16585 318 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 IQCCQ4KMZ1 466 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 SYT14P1Q58G82 188 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-214ENST00000513989 MYO7BQ6PIF6 2116 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 GFRALQ6UXV0 394 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 MBOAT2Q6ZWT7 520 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 OR6S1Q8NH40 331 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 SMPDL3BQ92485 455 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 ZHX1-C8orf76Q96EF9 292 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 OR5B2Q96R09 309 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 TIMP4Q99727 224 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 ZNF556Q9HAH1 456 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 ASF1BQ9NVP2 202 aa9.15□□□□□ -0.94
NEDD9-214ENST00000513989 C6orf203Q9P0P8 240 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-214ENST00000513989 TMEM5Q9Y2B1 443 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms