RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CCDC71Q8IV32 467 aaPredicted RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 LSMEM1Q8N8F7 131 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ANKS4BQ8N8V4 417 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 RELL2Q8NC24 303 aaPredicted RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 NAXEQ8NCW5 288 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 OR5M1Q8NGP8 315 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 OR6K3Q8NGY3 331 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 NFKBIDQ8NI38 313 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 FNDC9Q8TBE3 224 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 RNF128Q8TEB7 428 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 CNOT9Q92600 299 aaKnown RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 RNASE6Q93091 150 aaKnown RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 DDIT4LQ96D03 193 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ZHX1-C8orf76Q96EF9 292 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 LRRC37BQ96QE4 947 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ELAC2Q9BQ52 826 aaKnown RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ECSITQ9BQ95 431 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 PRRG4Q9BZD6 226 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ADAM19Q9H013 955 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 MYLK2Q9H1R3 596 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ZFAND3Q9H8U3 227 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 TCF7L1Q9HCS4 588 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ARMCX1Q9P291 453 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 KLHL9Q9P2J3 617 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 TESQ9UGI8 421 aaKnown RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 SLC13A4Q9UKG4 626 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 PCDHB10Q9UN67 800 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 TRAPPC4Q9Y296 219 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ARL2BPQ9Y2Y0 163 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 EMC9Q9Y3B6 208 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ADGRG4Q8IZF6 3080 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 A0A0J9YW62 118 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 A0A1W2PNV4 684 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FAM90A27PA6NNH2 459 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FAM220BPB1ANY3 271 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 EIF1BO60739 113 aaKnown RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FMO6PO60774 539 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 BCAS1O75363 584 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 TNFSF13O75888 250 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 MFN2O95140 757 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 TGM6O95932 706 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FAM107AO95990 144 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 PLGP00747 810 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 IFNA14P01570 189 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 PNMTP11086 282 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 COX4I1P13073 169 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 CD1EP15812 388 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 IL11P20809 199 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 RYKP34925 604 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 SFTPDP35247 375 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 ACAA2P42765 397 aaKnown RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 CAPRIN1Q14444 709 aaKnown RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 PDK3Q15120 406 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 CDSNQ15517 529 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 TMEM176BQ3YBM2 270 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 GKAP1Q5VSY0 366 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 SP5Q6BEB4 398 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 C6orf89Q6UWU4 347 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 TMPPEQ6ZT21 453 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FAM214BQ7L5A3 538 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 RANBP3LQ86VV4 465 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 CALHM3Q86XJ0 350 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 PTOV1Q86YD1 416 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 MCEMP1Q8IX19 187 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 ZZZ3Q8IYH5 903 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 C10orf111Q8N326 155 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 OR10A6Q8NH74 314 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 DNAJA4Q8WW22 397 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FIG4Q92562 907 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 OSTF1Q92882 214 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 INTS12Q96CB8 462 aaKnown RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 RCN3Q96D15 328 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 C14orf79Q96F83 325 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 ZNF845Q96IR2 970 aaPredicted RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 NPAS1Q99742 590 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 KLHDC3Q9BQ90 382 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 TRIM2Q9C040 744 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 POLR2J2Q9GZM3 115 aaKnown RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FAM107BQ9H098 131 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 POLR2J3Q9H1A7 115 aaKnown RBP7.33□□□□□ -1.24
NEDD4-210ENST00000513957 COQ10BQ9H8M1 238 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 CTPS2Q9NRF8 586 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 RLIMQ9NVW2 624 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 NDE1Q9NXR1 346 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 FAM53CQ9NYF3 392 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 KCNN3Q9UGI6 736 aa7.33□□□□□ -1.24
NEDD4-210ENST00000513957 PKDREJQ9NTG1 2253 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 TMED7-TICAM2A0A0A6YYA0 188 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 LOC100653049A0A140TA62 436 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 ANKRD34BA5PLL1 514 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 ZNF724A8MTY0 619 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 A8MXE2 369 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 KDM4EB2RXH2 506 aaPredicted RBP7.32□□□□□ -1.24
NEDD4-210ENST00000513957 EEF1E1-BLOC1S5C9J1V9 151 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 H0YC42 278 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 SULT2B1O00204 365 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 AP3D1O14617 1153 aa7.32□□□□□ -1.24
NEDD4-210ENST00000513957 EEF1E1O43324 174 aaKnown RBP7.32□□□□□ -1.24
NEDD4-210ENST00000513957 EFNA2O43921 213 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms