RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 BBIP1A8MTZ0 92 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 C16orf97H3BN30 126 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 SIAH2O43255 324 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 HRGP04196 525 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 PSMB1P20618 241 aaKnown RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 SLC6A2P23975 617 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 HTR2AP28223 471 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 LOXP28300 417 aaPredicted RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 SLC7A1P30825 629 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 P2RY4P51582 365 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 MTPNP58546 118 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 CSNK2A1P68400 391 aaPredicted RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 SIRPAP78324 504 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 EGR4Q05215 589 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 DMTNQ08495 405 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 NFYCQ13952 458 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 SCARB2Q14108 478 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 TESK1Q15569 626 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 GLIPR1L2Q4G1C9 344 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 C8orf82Q6P1X6 216 aaPredicted RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 CCDC80Q76M96 950 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 LSRQ86X29 649 aaPredicted RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 ZZZ3Q8IYH5 903 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 HIPK4Q8NE63 616 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 ATP6V1C2Q8NEY4 427 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 ZNF583Q96ND8 569 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 WFIKKN1Q96NZ8 548 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 GPATCH1Q9BRR8 931 aaKnown RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 SLC39A3Q9BRY0 314 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 TACO1Q9BSH4 297 aaKnown RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 PRRG4Q9BZD6 226 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 OR11A1Q9GZK7 315 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 MYLK2Q9H1R3 596 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 ARMC7Q9H6L4 198 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 TMEM181Q9P2C4 612 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 KLHL9Q9P2J3 617 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.63□□□□□ -1.03
RNF4-221ENST00000513643 MTORP42345 2549 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 ITPR3Q14573 2671 aa8.63□□□□□ -1.03
RNF4-221ENST00000513643 ALPK2Q86TB3 2170 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 IGHV3-15A0A0B4J1V0 119 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 A0A1W2PPR1 153 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 SH3D21A4FU49 640 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 LIPT2A6NK58 231 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 DEFB108AA8MXU0 73 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 FTCDNL1E5RQL4 147 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 SULT2B1O00204 365 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 RAMP1O60894 148 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 SMNDC1O75940 238 aaKnown RBP eCLIP8.62□□□□□ -1.03
RNF4-221ENST00000513643 CNOT4O95628 575 aaKnown RBP8.62□□□□□ -1.03
RNF4-221ENST00000513643 LGI1O95970 557 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 THBDP07204 575 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 FESP07332 822 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 C8BP07358 591 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 UQCRBP14927 111 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 EDNRAP25101 427 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 PCGF2P35227 344 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 OR3A2P47893 321 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 KCNJ5P48544 419 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 CTBP2P56545 445 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 RASGEF1BQ0VAM2 473 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 CYLC2Q14093 348 aaPredicted RBP8.62□□□□□ -1.03
RNF4-221ENST00000513643 CAPRIN1Q14444 709 aaKnown RBP8.62□□□□□ -1.03
RNF4-221ENST00000513643 DUSP7Q16829 419 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 RABL3Q5HYI8 236 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 BEND4Q6ZU67 534 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 C11orf65Q8NCR3 313 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 BHLHE22Q8NFJ8 381 aaPredicted RBP8.62□□□□□ -1.03
RNF4-221ENST00000513643 GPR32P1Q8NGA4 272 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 OR10A6Q8NH74 314 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 RP9Q8TA86 221 aaKnown RBP8.62□□□□□ -1.03
RNF4-221ENST00000513643 STK35Q8TDR2 534 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 ARHGDIGQ99819 225 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 PTDSS2Q9BVG9 487 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 SPATA5L1Q9BVQ7 753 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 EVA1AQ9H8M9 152 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 PLEKHF2Q9H8W4 249 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 GPR52Q9Y2T5 361 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 F8P00451 2351 aa8.62□□□□□ -1.03
RNF4-221ENST00000513643 IGKV1D-42A0A075B6H8 117 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 LOC100653049A0A140TA62 436 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 PRORSD1PA6NEY8 169 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 A8MVM7 634 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 C5orf58C9J3I9 102 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 M0QX08 132 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 FRS3O43559 492 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 SNX3O60493 162 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 EIF1BO60739 113 aaKnown RBP8.61□□□□□ -1.03
RNF4-221ENST00000513643 FMO6PO60774 539 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 SERPINB7O75635 380 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 KRT34O76011 436 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 LYPD3O95274 346 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 PLGP00747 810 aaPredicted RBP8.61□□□□□ -1.03
RNF4-221ENST00000513643 POU2F1P14859 743 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 PPP3CBP16298 524 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 CD247P20963 164 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 DRD4P21917 467 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 CRYGSP22914 178 aa8.61□□□□□ -1.03
RNF4-221ENST00000513643 CPA2P48052 419 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms