RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 LRRC37BQ96QE4 947 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 SUCNR1Q9BXA5 334 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 NMUR2Q9GZQ4 415 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 RACGAP1Q9H0H5 632 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 LPAR2Q9HBW0 351 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 ESM1Q9NQ30 184 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 CTPS2Q9NRF8 586 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 GPATCH2Q9NW75 528 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 KCNE5Q9UJ90 142 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 ZNF180Q9UJW8 692 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 TRAPPC4Q9Y296 219 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 ARFGEF3Q5TH69 2177 aa9.47□□□□□ -0.89
DDX41-216ENST00000513562 ARPC4-TTLL3A0A0A6YYG9 625 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 CENPVL1A0A0U1RR11 272 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 TMEM129A0AVI4 362 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 ANKRD28O15084 1053 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 SEC22BO75396 215 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 CYP7B1O75881 506 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 PNPP00491 289 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 UBTFL6P0CB48 400 aaPredicted RBP9.46□□□□□ -0.9
DDX41-216ENST00000513562 CDH2P19022 906 aaPredicted RBP9.46□□□□□ -0.9
DDX41-216ENST00000513562 NPR2P20594 1047 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 FKBP2P26885 142 aaKnown RBP9.46□□□□□ -0.9
DDX41-216ENST00000513562 THBS4P35443 961 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 CLK1P49759 484 aaKnown RBP9.46□□□□□ -0.9
DDX41-216ENST00000513562 OR2B6P58173 313 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 HGFACQ04756 655 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 C2orf54Q08AI8 447 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 SLC17A1Q14916 467 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 ZNF141Q15928 474 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 ADRM1Q16186 407 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 ANKRD16Q6P6B7 361 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 SPATA21Q7Z572 469 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 LCA5Q86VQ0 697 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 CDK20Q8IZL9 346 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 ZDHHC22Q8N966 263 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 POMGNT2Q8NAT1 580 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 FAM71CQ8NEG0 241 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 OR56A1Q8NGH5 318 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 OR1K1Q8NGR3 316 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 OR51F2Q8NH61 342 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 CLHC1Q8NHS4 586 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 PSMA8Q8TAA3 256 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 DCAKDQ8WVC6 231 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 MTERF3Q96E29 417 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 ZNF317Q96PQ6 595 aaPredicted RBP9.46□□□□□ -0.9
DDX41-216ENST00000513562 OR11A1Q9GZK7 315 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 SEC61A2Q9H9S3 476 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 DYNLRB1Q9NP97 96 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 ZDHHC18Q9NUE0 388 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 C1orf109Q9NX04 203 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 TMEM181Q9P2C4 612 aa9.46□□□□□ -0.9
DDX41-216ENST00000513562 FAF1Q9UNN5 650 aaPredicted RBP9.46□□□□□ -0.9
DDX41-216ENST00000513562 LOC105371242A0A075B767 164 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 TRAV20A0A0B4J274 112 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 H3BQF6 201 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 EIF1BO60739 113 aaKnown RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 CSTAP01040 98 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 AVPP01185 164 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 IGKV3-15P01624 115 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 HKR1P10072 659 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 GAAP10253 952 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 SAGP10523 405 aaPredicted RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 UBA52P62987 128 aaKnown RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 POU3F1Q03052 451 aaPredicted RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 FOXL1Q12952 345 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 TP53BP2Q13625 1128 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 FAHD2BQ6P2I3 314 aaPredicted RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 GRINAQ7Z429 371 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 ABHD12BQ7Z5M8 362 aaPredicted RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 RELL1Q8IUW5 271 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 FAM169BQ8N8A8 192 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 ZIC4Q8N9L1 334 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 FAHD2AQ96GK7 314 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 ANKRD27Q96NW4 1050 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 SDF2Q99470 211 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 CDC42EP4Q9H3Q1 356 aaKnown RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 MOV10Q9HCE1 1003 aaKnown RBP9.45□□□□□ -0.9
DDX41-216ENST00000513562 TNFRSF12AQ9NP84 129 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 TMEM45AQ9NWC5 275 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 PTGDR2Q9Y5Y4 395 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 VWFP04275 2813 aa9.45□□□□□ -0.9
DDX41-216ENST00000513562 SH3PXD2BA1X283 911 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 VSTM5A8MXK1 200 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 WNT9BO14905 357 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 CRCPO75575 148 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 UGT2B17O75795 530 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 LGI1O95970 557 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 ADRA2AP08913 450 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 SNRPAP09012 282 aaKnown RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 PGM1P36871 562 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 GPR6P46095 362 aaPredicted RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 CCT3P49368 545 aaKnown RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 UBE2NP61088 152 aaKnown RBP9.44□□□□□ -0.9
DDX41-216ENST00000513562 SLC35A1P78382 337 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 ELFN2Q5R3F8 820 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 EMBQ6PCB8 327 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 PAQR6Q6TCH4 344 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 FRMD7Q6ZUT3 714 aa9.44□□□□□ -0.9
DDX41-216ENST00000513562 EIF3MQ7L2H7 374 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms