RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 AP4B1Q9Y6B7 739 aa11.31□□□□□ -0.6
PDPN-210ENST00000513143 NBEAQ8NFP9 2946 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 TRGV5A0A0B4J1U4 118 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 A0A1B0GVC2 190 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 ZC3H12DA2A288 527 aaKnown RBP11.3□□□□□ -0.6
PDPN-210ENST00000513143 HTR3EA5X5Y0 456 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 ARRDC5A6NEK1 342 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 CASQ2O14958 399 aaPredicted RBP11.3□□□□□ -0.6
PDPN-210ENST00000513143 ZNF23P17027 643 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 CLK1P49759 484 aaKnown RBP11.3□□□□□ -0.6
PDPN-210ENST00000513143 CTBP2P56545 445 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 PRKCDQ05655 676 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 LAPTM4AQ15012 233 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 SYT14P1Q58G82 188 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 NHSL2Q5HYW2 709 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 ZNF324BQ6AW86 544 aaPredicted RBP11.3□□□□□ -0.6
PDPN-210ENST00000513143 ZNF770Q6IQ21 691 aaPredicted RBP11.3□□□□□ -0.6
PDPN-210ENST00000513143 FAM180AQ6UWF9 173 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 C5orf46Q6UWT4 87 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 TRILQ7L0X0 811 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 RRM2BQ7LG56 351 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 NRMQ8IXM6 262 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 HS3ST5Q8IZT8 346 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 DDIT4LQ96D03 193 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 CIB1Q99828 191 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 POTEKPQ9BYX7 375 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 PDP1Q9P0J1 537 aaPredicted RBP11.3□□□□□ -0.6
PDPN-210ENST00000513143 SLC6A5Q9Y345 797 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 MAGED1Q9Y5V3 778 aaPredicted RBP11.3□□□□□ -0.6
PDPN-210ENST00000513143 LIPGQ9Y5X9 500 aa11.3□□□□□ -0.6
PDPN-210ENST00000513143 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 SAC3D1A6NKF1 404 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 NPIPA5E9PKD4 350 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 H3BML4 177 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PIP5K1CO60331 668 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 OR10H3O60404 316 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 WISP2O76076 250 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 SVILO95425 2214 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 ACTL6AO96019 429 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PEPDP12955 493 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PTNP21246 168 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PRKACGP22612 351 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 GCKP35557 465 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 IFNGR2P38484 337 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 ATRXP46100 2492 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 OMPP47874 163 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 CRYZQ08257 329 aaKnown RBP11.29□□□□□ -0.6
PDPN-210ENST00000513143 GTF3C1Q12789 2109 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 TRIP10Q15642 601 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 C1orf140Q5VVS0 124 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 C1QL3Q5VWW1 255 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 FBXW10Q5XX13 1052 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 VASNQ6EMK4 673 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 C1orf94Q6P1W5 598 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PRICKLE2Q7Z3G6 844 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 ZER1Q7Z7L7 766 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 STK32CQ86UX6 486 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 CISD2Q8N5K1 135 aaKnown RBP11.29□□□□□ -0.6
PDPN-210ENST00000513143 ATP6V1C2Q8NEY4 427 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 OR10G2Q8NGC3 310 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 OR9Q2Q8NGE9 314 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 OR6S1Q8NH40 331 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PFN4Q8NHR9 129 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PIGXQ8TBF5 258 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 KTI12Q96EK9 354 aaPredicted RBP11.29□□□□□ -0.6
PDPN-210ENST00000513143 ARL5BQ96KC2 179 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 KLHL4Q9C0H6 718 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 OR11A1Q9GZK7 315 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 GABARAPL1Q9H0R8 117 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 TSPAN10Q9H1Z9 355 aaPredicted RBP11.29□□□□□ -0.6
PDPN-210ENST00000513143 LDAHQ9H6V9 325 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 C20orf141Q9NUB4 165 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 STOML1Q9UBI4 398 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 NPIPA1Q9UND3 350 aa11.29□□□□□ -0.6
PDPN-210ENST00000513143 PRRC2CQ9Y520 2896 aaKnown RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 KIAA1549Q9HCM3 1950 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 GJE1A6NN92 205 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 ENO4A6NNW6 628 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 PDLIM1O00151 329 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 KPNA4O00629 521 aaPredicted RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 AQP7O14520 342 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 GASTP01350 101 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 TFPIP10646 304 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 IFI30P13284 250 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 BMP7P18075 431 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 POU3F2P20265 443 aaPredicted RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 CBLP22681 906 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 SHC1P29353 583 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 SFTPDP35247 375 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 STARP49675 285 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 LHX2P50458 406 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 TMEM176BQ3YBM2 270 aaPredicted RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 OGFRL1Q5TC84 451 aaPredicted RBP11.28□□□□□ -0.6
PDPN-210ENST00000513143 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 LPCAT4Q643R3 524 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 PGBD2Q6P3X8 592 aa11.28□□□□□ -0.6
PDPN-210ENST00000513143 FAHD1Q6P587 224 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms