RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 MISPQ8IVT2 679 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CLEC18CQ8NCF0 446 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 AGBL5Q8NDL9 886 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 KBTBD8Q8NFY9 601 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 NUBPLQ8TB37 319 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 RNF217Q8TC41 542 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 LIPHQ8WWY8 451 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 METTL21AQ8WXB1 218 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 EFHD2Q96C19 240 aaPredicted RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 LGALS12Q96DT0 336 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CLIP3Q96DZ5 547 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 SGTBQ96EQ0 304 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 RNFT2Q96EX2 444 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 MGLLQ99685 303 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 WDR54Q9H977 334 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CMC2Q9NRP2 79 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 C20orf141Q9NUB4 165 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 H2AFY2Q9P0M6 372 aaPredicted RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 C19orf25Q9UFG5 118 aaPredicted RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 EXOGQ9Y2C4 368 aaKnown RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 PCDHGB6Q9Y5F9 930 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 PCDHGA3Q9Y5H0 932 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 LRRK2Q5S007 2527 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 UNC13CQ8NB66 2214 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 OR6C70A6NIJ9 312 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 IDSB3KWA1 339 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 GTPBP1O00178 669 aaKnown RBP11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 AIREO43918 545 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 ADAM11O75078 769 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 REM1O75628 298 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 IFNGP01579 166 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 SAGP10523 405 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 CDK4P11802 303 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 NAGAP17050 411 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 ACP1P24666 158 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 CLK1P49759 484 aaKnown RBP11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 EMP2P54851 167 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 NRG3P56975 720 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 FXYD6P3P58550 94 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 PLCXD2Q0VAA5 305 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 EFR3AQ14156 821 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 RTP5Q14D33 572 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 SPHARQ15513 63 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 PHF19Q5T6S3 580 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 ARHGAP11AQ6P4F7 1023 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 DHRS13Q6UX07 377 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 USP43Q70EL4 1123 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 OAFQ86UD1 273 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 LAPTM4BQ86VI4 370 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 MEX3DQ86XN8 651 aaKnown RBP11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 CADM2Q8N3J6 435 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 NFAM1Q8NET5 270 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 OR9Q1Q8NGQ5 310 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 TBC1D15Q8TC07 691 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 PHOSPHO1Q8TCT1 267 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 RHBDD1Q8TEB9 315 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 C3orf49Q96BT1 292 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 DTNBP1Q96EV8 351 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 VMP1Q96GC9 406 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 DACH2Q96NX9 599 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 GAL3ST4Q96RP7 486 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 TAPBPLQ9BX59 468 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 NDEL1Q9GZM8 345 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 SYNDIG1Q9H7V2 258 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 SIAEQ9HAT2 523 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 PLGRKTQ9HBL7 147 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 ATP13A2Q9NQ11 1180 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 A3GALT2U3KPV4 340 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 CABIN1Q9Y6J0 2220 aa11.99□□□□□ -0.49
DEPDC1B-206ENST00000512452 POLQO75417 2590 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 RP1P56715 2156 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 RIIAD1A6NNX1 92 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 IDH3BO43837 385 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 NDUFB2O95178 105 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 PEPDP12955 493 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 HK1P19367 917 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 NR0B1P51843 470 aaKnown RBP11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 MC2RQ01718 297 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 CRYZQ08257 329 aaKnown RBP11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 MED22Q15528 200 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 CD226Q15762 336 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 TMEM205Q6UW68 189 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 HSDL2Q6YN16 418 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 CXXC5Q7LFL8 322 aaKnown RBP11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 ATG4DQ86TL0 474 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 BMPERQ8N8U9 685 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 SLC38A9Q8NBW4 561 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 PSD4Q8NDX1 1056 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 OR13C2Q8NGS9 318 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 DYNC2LI1Q8TCX1 351 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 OMA1Q96E52 524 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 ZHX1-C8orf76Q96EF9 292 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 LMF1Q96S06 567 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 ADOQ96SZ5 270 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 NRSN2Q9GZP1 204 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 FBXO8Q9NRD0 319 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 INPP5EQ9NRR6 644 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 SEC14L4Q9UDX3 406 aa11.98□□□□□ -0.49
DEPDC1B-206ENST00000512452 KLHL21Q9UJP4 597 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms