RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 GABRG1Q8N1C3 465 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 DDIT4LQ96D03 193 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 ADAM19Q9H013 955 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 RABEP2Q9H5N1 569 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 CACYBPQ9HB71 228 aaKnown RBP14.63□□□□□ -0.07
DDX41-213ENST00000512027 TMEM45AQ9NWC5 275 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 ZNF226Q9NYT6 803 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 TMEM181Q9P2C4 612 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 TRIM33Q9UPN9 1127 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 IFT52Q9Y366 437 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 NDUFAF1Q9Y375 327 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 HDGFL3Q9Y3E1 203 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 ANGPT2O15123 496 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 TPST1O60507 370 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 ADAP00813 363 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 IGHV3-9P01782 118 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 GPX2P18283 190 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 PPIBP23284 216 aaKnown RBP14.62□□□□□ -0.07
DDX41-213ENST00000512027 CXCR1P25024 350 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 LOXP28300 417 aaPredicted RBP14.62□□□□□ -0.07
DDX41-213ENST00000512027 PRRC2AP48634 2157 aaKnown RBP14.62□□□□□ -0.07
DDX41-213ENST00000512027 IRX1P78414 480 aaPredicted RBP14.62□□□□□ -0.07
DDX41-213ENST00000512027 SCARB2Q14108 478 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 CAPRIN1Q14444 709 aaKnown RBP14.62□□□□□ -0.07
DDX41-213ENST00000512027 ADRM1Q16186 407 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 PRAMEF8Q5VWM4 474 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 PRAMEF7Q5VXH5 474 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 WBP2NLQ6ICG8 309 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 C3orf49Q96BT1 292 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 S100PBPQ96BU1 408 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 SIKE1Q9BRV8 207 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 PRR14Q9BWN1 585 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 GP6Q9HCN6 339 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 ZNF232Q9UNY5 417 aa14.62□□□□□ -0.07
DDX41-213ENST00000512027 RAI1Q7Z5J4 1906 aaPredicted RBP14.62□□□□□ -0.07
DDX41-213ENST00000512027 EVPLLA8MZ36 301 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 FBP2O00757 339 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 ZNF208O43345 1280 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 ATE1O95260 518 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 VIMP08670 466 aaKnown RBP14.61□□□□□ -0.07
DDX41-213ENST00000512027 TROVE2P10155 538 aaKnown RBP eCLIP14.61□□□□□ -0.07
DDX41-213ENST00000512027 PSMB1P20618 241 aaKnown RBP14.61□□□□□ -0.07
DDX41-213ENST00000512027 FPR1P21462 350 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 DNASE1P24855 282 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 NTF4P34130 210 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 OR3A2P47893 321 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 COPZ1P61923 177 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 NFYCQ13952 458 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 REEP3Q6NUK4 255 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 GALNT5Q7Z7M9 940 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 PTOV1Q86YD1 416 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 DPP10Q8N608 796 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 ZHX1-C8orf76Q96EF9 292 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 CGREF1Q99674 301 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 WFDC6Q9BQY6 131 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 GMEB1Q9Y692 573 aa14.61□□□□□ -0.07
DDX41-213ENST00000512027 ZNF469Q96JG9 3925 aaPredicted RBP14.6□□□□□ -0.07
DDX41-213ENST00000512027 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.6□□□□□ -0.07
DDX41-213ENST00000512027 ZNF724A8MTY0 619 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 KLF4O43474 513 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 LYZL6O75951 148 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 GOSR1O95249 250 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 RAF1P04049 648 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 ETS2P15036 469 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 ADSLP30566 484 aaPredicted RBP14.6□□□□□ -0.07
DDX41-213ENST00000512027 IDUAP35475 653 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 CLK1P49759 484 aaKnown RBP14.6□□□□□ -0.07
DDX41-213ENST00000512027 ARFIP2P53365 341 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 CEACAM7Q14002 265 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 OR7A5Q15622 319 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 SFRP5Q5T4F7 317 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 ATG4DQ86TL0 474 aaPredicted RBP14.6□□□□□ -0.07
DDX41-213ENST00000512027 ZNF100Q8IYN0 542 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 NINJ1Q92982 152 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 ANKRD27Q96NW4 1050 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 TACO1Q9BSH4 297 aaKnown RBP14.6□□□□□ -0.07
DDX41-213ENST00000512027 TMEM38AQ9H6F2 299 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 UBTD1Q9HAC8 227 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 GPR52Q9Y2T5 361 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 ROS1P08922 2347 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 MED13LQ71F56 2210 aa14.6□□□□□ -0.07
DDX41-213ENST00000512027 IGKV3D-15A0A087WSY6 115 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 LIPT2A6NK58 231 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 TMEM229AB2RXF0 380 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 AKR7A3O95154 331 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 PLAUP00749 431 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 OPN1SWP03999 348 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 PTNP21246 168 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 SLC6A2P23975 617 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 IL32P24001 234 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 HTR2AP28223 471 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 PRKAR1BP31321 381 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 FOXG1P55316 489 aaPredicted RBP14.59□□□□□ -0.07
DDX41-213ENST00000512027 SLC35A1P78382 337 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 H3F3AP84243 136 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 DMTNQ08495 405 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 KEAP1Q14145 624 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 CYP51A1Q16850 503 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
DDX41-213ENST00000512027 Q6ZT83 130 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms