RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SERPINB12Q96P63 405 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PFDN5Q99471 154 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MAP3K3Q99759 626 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SOX7Q9BT81 388 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 H2AFJQ9BTM1 129 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ENKD1Q9H0I2 346 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 UGT1A7Q9HAW7 530 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 UGT1A8Q9HAW9 530 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC6A20Q9NP91 592 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 KCNK9Q9NPC2 374 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 EQTNQ9NQ60 294 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NECAP2Q9NVZ3 263 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SDHAF2Q9NX18 166 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TAS2R1Q9NYW7 299 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRR13Q9NZ81 148 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 KIAA1456Q9P272 454 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF282Q9UDV7 671 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FTSJ1Q9UET6 329 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SERTAD3Q9UJW9 196 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NOTCH4Q99466 2003 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 RFPL4AA6NLU0 287 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 LOC730098B7Z3J9 87 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 E9PQ18 207 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 RFPL4AL1F8VTS6 287 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 M0QZ24 198 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 AIREO43918 545 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MFAP3LO75121 409 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TNFAIP8O95379 198 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 AP2A1O95782 977 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TSPAN12O95859 305 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FADS2O95864 444 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SAGP10523 405 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 VPREB1P12018 145 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 IGFBP2P18065 325 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MMP11P24347 488 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 RBMS1P29558 406 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SSTR2P30874 369 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NPBWR2P48146 333 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MEOX2P50222 304 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCL11P51671 97 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CHN2P52757 468 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 UCNP55089 124 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PITX1P78337 314 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CD300CQ08708 224 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF844Q08AG5 666 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NME3Q13232 169 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CDK5R2Q13319 367 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MED21Q13503 144 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 HTR4Q13639 388 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNPS1Q15287 305 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NDUFA9Q16795 377 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 AGAP7PQ5VUJ5 663 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM225Q6GV28 225 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CYHR1Q6ZMK1 362 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 Q6ZNB5 142 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 Q6ZVU0 165 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNF144BQ7Z419 303 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TGIF2LXQ8IUE1 241 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCDC71Q8IV32 467 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NRMQ8IXM6 262 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PGAM4Q8N0Y7 254 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PUSL1Q8N0Z8 303 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM109AQ8N4B1 249 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCDC71LQ8N9Z2 235 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 KYQ8NBH2 561 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR52N2Q8NGI0 321 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZFP28Q8NHY6 868 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNF141Q8WVD5 230 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 STMN2Q93045 179 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 HIST1H2AHQ96KK5 128 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NPAS1Q99742 590 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CPNE1Q99829 537 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 HIST1H2AJQ99878 128 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 AGPAT1Q99943 283 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NIPSNAP1Q9BPW8 284 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM109Q9BVC6 243 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 C1QTNF7Q9BXJ2 289 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 C11orf54Q9H0W9 315 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PPIL3Q9H2H8 161 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 LINC00597Q9H2U6 94 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PLEKHA1Q9HB21 404 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TIGARQ9NQ88 270 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 POLE4Q9NR33 117 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 GSN-AS1Q9NRJ2 163 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 HEBP1Q9NRV9 189 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 LANCL2Q9NS86 450 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TEX10Q9NXF1 929 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 RSL24D1Q9UHA3 163 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZFR2Q9UPR6 939 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SCML2Q9UQR0 700 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ALG6Q9Y672 507 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 OAS3Q9Y6K5 1087 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MYO10Q9HD67 2058 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 A0A1B0GV72 72 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NEMP2A6NFY4 417 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NKX6-3A6NJ46 265 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NEDD8-MDP1E9PL57 170 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 M0QZK8 103 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 LEFTY2O00292 366 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 ACOX3O15254 700 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms