RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ZNF239Q16600 458 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 DUSP7Q16829 419 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 FBXL19-AS1Q494R0 122 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 C1orf146Q5VVC0 180 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 HIST2H2BCQ6DN03 193 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 C8orf82Q6P1X6 216 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TMPPEQ6ZT21 453 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 RANBP3LQ86VV4 465 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 MICU2Q8IYU8 434 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 DEFB107AQ8IZN7 70 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 SLC43A2Q8N370 569 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 LSMEM1Q8N8F7 131 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 CNEP1R1Q8N9A8 125 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 SMYD1Q8NB12 490 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 OR2T12Q8NG77 320 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 OR52E4Q8NGH9 312 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ROBO4Q8WZ75 1007 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 STMN2Q93045 179 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 RNASE6Q93091 150 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 UTP4Q969X6 686 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 STARD4Q96DR4 205 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ZHX1-C8orf76Q96EF9 292 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 GMPPAQ96IJ6 420 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 SPOCK3Q9BQ16 436 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 RSPO3Q9BXY4 272 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 SRXN1Q9BYN0 137 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 POTEKPQ9BYX7 375 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TRIM2Q9C040 744 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 COQ10BQ9H8M1 238 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TMEM27Q9HBJ8 222 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 NPDC1Q9NQX5 325 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 CMTM6Q9NX76 183 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 JKAMPQ9P055 326 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TMEM181Q9P2C4 612 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 RPS6KB2Q9UBS0 482 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TESQ9UGI8 421 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 FOXD3Q9UJU5 478 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 PACSIN3Q9UKS6 424 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 USP22Q9UPT9 525 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TRAPPC4Q9Y296 219 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 EMC9Q9Y3B6 208 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 PCNX1Q96RV3 2341 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 USP9YO00507 2555 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 HEATR5AQ86XA9 2040 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 TMEM72A0PK05 275 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 A8MVM7 634 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 A8MXE2 369 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 NME4O00746 187 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 MSTNO14793 375 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 GSTA4O15217 222 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 DNPH1O43598 174 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 MGRN1O60291 552 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 SS18L1O75177 396 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 SMNDC1O75940 238 aaKnown RBP eCLIP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 PRKD3O94806 890 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 PNMTP11086 282 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 KDELR2P33947 212 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 PEX19P40855 299 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 SLC7A2P52569 658 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 OR2B6P58173 313 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 PSME3P61289 254 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 SIRPAP78324 504 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 RIPK1Q13546 671 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 GUSBP1Q15486 140 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ZNF787Q6DD87 383 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ULK3Q6PHR2 472 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 MEX3BQ6ZN04 569 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 FCRLAQ7L513 359 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 BTLAQ7Z6A9 289 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 LUZP2Q86TE4 346 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ATG4DQ86TL0 474 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 COMTD1Q86VU5 262 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 PGAM4Q8N0Y7 254 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ACBD4Q8NC06 268 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 GPR32P1Q8NGA4 272 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 RNF128Q8TEB7 428 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ABHD3Q8WU67 409 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 DNAJA4Q8WW22 397 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 PROX1Q92786 737 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 C3orf49Q96BT1 292 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 TAMM41Q96BW9 452 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 CCDC124Q96CT7 223 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 SLC47A1Q96FL8 570 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ARL5BQ96KC2 179 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 MCHR1Q99705 422 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ARHGDIGQ99819 225 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ZNF559Q9BR84 538 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 TACO1Q9BSH4 297 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 NAA11Q9BSU3 229 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 RBM24Q9BX46 236 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 OR11A1Q9GZK7 315 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ENKD1Q9H0I2 346 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ALG2Q9H553 416 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 C12orf10Q9HB07 376 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 SLC24A3Q9HC58 644 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 GP6Q9HCN6 339 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 SPAG4Q9NPE6 437 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 PLSCR4Q9NRQ2 329 aa6.39□□□□□ -1.39
PDLIM5-215ENST00000511586 ADA2Q9NZK5 511 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms