RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 NSUN5P1Q3KNT7 163 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 DMRTC1Q5HYR2 192 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 SAMD4BQ5PRF9 694 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 C1orf146Q5VVC0 180 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 OTPQ5XKR4 325 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZSCAN25Q6NSZ9 544 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 RGS9BPQ6ZS82 235 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 GDPD3Q7L5L3 318 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZNF571Q7Z3V5 609 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR2L13Q8N349 312 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 Q8N7P7 452 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 STEAP2Q8NFT2 490 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 DNAJA4Q8WW22 397 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 PIGCQ92535 297 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 SEC22AQ96IW7 307 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 RPRD1AQ96P16 312 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 SECISBP2Q96T21 854 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZNF670Q9BS34 389 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 RAB34Q9BZG1 259 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 VCX2Q9H322 139 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 LRRN3Q9H3W5 708 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 RBKSQ9H477 322 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZDHHC11Q9H8X9 412 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 APMAPQ9HDC9 416 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 POLE4Q9NR33 117 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 AIG1Q9NVV5 245 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 SMPD3Q9NY59 655 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 PRPF19Q9UMS4 504 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 SLCO1B1Q9Y6L6 691 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 A6NIZ1 184 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 USP27XA6NNY8 438 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 IDSB3KWA1 339 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 MBTPS2O43462 519 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 MED7O43513 233 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 SNNO75324 88 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 KLF8O95600 359 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 OPN1MWP04001 364 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 OPN1MW2P0DN77 364 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 OPN1MW3P0DN78 364 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 DBTP11182 482 aaKnown RBP2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 ELK1P19419 428 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 COX5AP20674 150 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 COX7A1P24310 79 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 GNA11P29992 359 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 RAP1BP61224 184 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 GNB2P62879 340 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 TGFBR3Q03167 851 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 PDK3Q15120 406 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 NSDHLQ15738 373 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 SLC15A2Q16348 729 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 IL17AQ16552 155 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 DPYSL2Q16555 572 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 EXOC3L2Q2M3D2 409 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 C2orf83Q53S99 150 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 PAGE3Q5JUK9 113 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 HSDL2Q6YN16 418 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 Q6ZN92 141 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 TBC1D21Q8IYX1 336 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 SLC34A3Q8N130 599 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 DCAF4L2Q8NA75 395 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR4K14Q8NGD5 310 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR52M1Q8NGK5 317 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 C7orf33Q8WU49 177 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 FAM151AQ8WW52 585 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 CHCHD10Q8WYQ3 142 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 EMG1Q92979 244 aaKnown RBP2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 TIMD4Q96H15 378 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 CLCC1Q96S66 551 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 RNF2Q99496 336 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 NPAS2Q99743 824 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 TSG101Q99816 390 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 CCT7Q99832 543 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 REEP4Q9H6H4 257 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 NANOGQ9H9S0 305 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 FOLH1BQ9HBA9 442 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 PLGRKTQ9HBL7 147 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 HOXC10Q9NYD6 342 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 RPS6KB2Q9UBS0 482 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 CDH9Q9ULB4 789 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 STAP1Q9ULZ2 295 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 TMCO1Q9UM00 188 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 CLEC4AQ9UMR7 237 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 ASF1AQ9Y294 204 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 V9GY05 133 aa2.37□□□□□ -2.03
TRAPPC11-207ENST00000511409 RPAP1Q9BWH6 1393 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 PTCH1Q13635 1447 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 THSD7BQ9C0I4 1608 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 IQANK1A0A1B0GTG1 560 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 PCP4L1A6NKN8 68 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 A8MXQ7 604 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 DCTN6O00399 190 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZNF780AO75290 641 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 STAMBPO95630 424 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 OXSR1O95747 527 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 LGI1O95970 557 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 NCK1P16333 377 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 RFC4P35249 363 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 MAP3K8P41279 467 aa2.36□□□□□ -2.03
TRAPPC11-207ENST00000511409 CASP4P49662 377 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms