RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ECSITQ9BQ95 431 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 WFDC6Q9BQY6 131 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 NSRP1Q9H0G5 558 aaKnown RBP12.45□□□□□ -0.42
DDX41-212ENST00000511040 MCCC2Q9HCC0 563 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 PLSCR4Q9NRQ2 329 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 GID8Q9NWU2 228 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 KLHL13Q9P2N7 655 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 ING1Q9UK53 422 aaPredicted RBP12.45□□□□□ -0.42
DDX41-212ENST00000511040 SLC13A4Q9UKG4 626 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 HDGFL3Q9Y3E1 203 aa12.45□□□□□ -0.42
DDX41-212ENST00000511040 DCHS2Q6V1P9 2916 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 ITPR2Q14571 2701 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 PRORSD1PA6NEY8 169 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 CCT8L1PA6NM43 557 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 ZNF814B7Z6K7 855 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 M0R3H8 397 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 ZNF208O43345 1280 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 CYTIPO60759 359 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 RAMP1O60894 148 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 PMS2P2O95744 297 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 CD79BP40259 229 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 SORDQ00796 357 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 ANKRD34AQ69YU3 496 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.44□□□□□ -0.42
DDX41-212ENST00000511040 TMEM200AQ86VY9 491 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 CALHM3Q86XJ0 350 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 CCDC103Q8IW40 242 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 SLC43A2Q8N370 569 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 GPR32P1Q8NGA4 272 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 OR52E4Q8NGH9 312 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 RP9Q8TA86 221 aaKnown RBP12.44□□□□□ -0.42
DDX41-212ENST00000511040 FAM222BQ8WU58 562 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 C3orf49Q96BT1 292 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 TAMM41Q96BW9 452 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 ZHX1-C8orf76Q96EF9 292 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 LURAP1Q96LR2 239 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 SH3GL1Q99961 368 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 PSD2Q9BQI7 771 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 KLHL4Q9C0H6 718 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 TMEM181Q9P2C4 612 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 GMPR2Q9P2T1 348 aaKnown RBP12.44□□□□□ -0.42
DDX41-212ENST00000511040 RPS6KB2Q9UBS0 482 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 MPDZO75970 2070 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
DDX41-212ENST00000511040 A0A1B0GWA3 101 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 SH3D21A4FU49 640 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 SNX3O60493 162 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 NPPAP01160 153 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 YES1P07947 543 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 FPR1P21462 350 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 CCKARP32238 428 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 UGT2B10P36537 528 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 PEX19P40855 299 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 CLK1P49759 484 aaKnown RBP12.43□□□□□ -0.42
DDX41-212ENST00000511040 RGS8P57771 180 aaPredicted RBP12.43□□□□□ -0.42
DDX41-212ENST00000511040 CEACAM7Q14002 265 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 DUSP7Q16829 419 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 VMACQ2NL98 169 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 ATG4DQ86TL0 474 aaPredicted RBP12.43□□□□□ -0.42
DDX41-212ENST00000511040 RNF217Q8TC41 542 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 SLC35B4Q969S0 331 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 GPATCH1Q9BRR8 931 aaKnown RBP12.43□□□□□ -0.42
DDX41-212ENST00000511040 MYLK2Q9H1R3 596 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 KLHL28Q9NXS3 571 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 ELOVL5Q9NYP7 299 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 KLHL9Q9P2J3 617 aa12.43□□□□□ -0.42
DDX41-212ENST00000511040 ELOA3DA6NLF2 546 aaPredicted RBP12.42□□□□□ -0.42
DDX41-212ENST00000511040 A8MVM7 634 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 EPXP11678 715 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 CD247P20963 164 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 PTNP21246 168 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 EDNRAP25101 427 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 FKBP2P26885 142 aaKnown RBP12.42□□□□□ -0.42
DDX41-212ENST00000511040 IDUAP35475 653 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 NCALDP61601 193 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 SLC35A1P78382 337 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 OR7A5Q15622 319 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 ELOA3BQ3SY89 546 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 ABLIM2Q6H8Q1 611 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 TFAP2EQ6VUC0 442 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 PATL1Q86TB9 770 aaKnown RBP12.42□□□□□ -0.42
DDX41-212ENST00000511040 STK32CQ86UX6 486 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 P3H2Q8IVL5 708 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 SLC30A8Q8IWU4 369 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 ELOA3Q8NG57 546 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 VANGL1Q8TAA9 524 aaPredicted RBP12.42□□□□□ -0.42
DDX41-212ENST00000511040 SLC26A7Q8TE54 656 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 ZC3HAV1LQ96H79 300 aaKnown RBP12.42□□□□□ -0.42
DDX41-212ENST00000511040 ZNF583Q96ND8 569 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 BCO1Q9HAY6 547 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 ADPRHL2Q9NX46 363 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 CMTM6Q9NX76 183 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 TRAPPC4Q9Y296 219 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 TESMINQ9Y4I5 508 aa12.42□□□□□ -0.42
DDX41-212ENST00000511040 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 LIPT2A6NK58 231 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms