RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 POLR2HP52434 150 aaKnown RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 SLC35A1P78382 337 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 TXNL4AP83876 142 aaKnown RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 LRRC74AQ0VAA2 488 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 AP1ARQ63HQ0 302 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 OGFOD2Q6N063 350 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 TMEM108Q6UXF1 575 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 DNAJC14Q6Y2X3 702 aaPredicted RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 LRRC74BQ6ZQY2 392 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 CROCCP2Q86T23 111 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 PRIMA1Q86XR5 153 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 CMIPQ8IY22 773 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 DEPDC4Q8N2C3 294 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 PNPT1Q8TCS8 783 aaKnown RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 MGARPQ8TDB4 240 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 WDR60Q8WVS4 1066 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 RADILQ96JH8 1075 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 TRAF4Q9BUZ4 470 aaPredicted RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 SLC38A1Q9H2H9 487 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 AIG1Q9NVV5 245 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 NPAP1Q9NZP6 1156 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 UPB1Q9UBR1 384 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 OSGIN1Q9UJX0 560 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 MGAT4BQ9UQ53 548 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 FREM1Q5H8C1 2179 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 A0A1W2PR80 420 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 TMEM72A0PK05 275 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 AGAP5A6NIR3 686 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 TRPC5OSA6NMA1 111 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 KIAA1324LA8MWY0 1029 aaPredicted RBP13.56□□□□□ -0.24
TPM3-219ENST00000509409 SHISA9B4DS77 424 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 DNPH1O43598 174 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 EIF1BO60739 113 aaKnown RBP13.56□□□□□ -0.24
TPM3-219ENST00000509409 KRT75O95678 551 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 CD8AP01732 235 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 CHRM4P08173 479 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 UQCRBP14927 111 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 EPHA3P29320 983 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 TACR3P29371 465 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 CDKN2CP42773 168 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 AGAP6Q5VW22 663 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 SLC22A25Q6T423 547 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 SEZ6L2Q6UXD5 910 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 PEX5LQ8IYB4 626 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 C1QTNF6Q9BXI9 259 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 SLCO5A1Q9H2Y9 848 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 WDR55Q9H6Y2 383 aaPredicted RBP13.56□□□□□ -0.24
TPM3-219ENST00000509409 BARX1Q9HBU1 254 aaPredicted RBP13.56□□□□□ -0.24
TPM3-219ENST00000509409 PARPBPQ9NWS1 579 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
TPM3-219ENST00000509409 NSD1Q96L73 2696 aaPredicted RBP13.56□□□□□ -0.24
TPM3-219ENST00000509409 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 M0R1B8 84 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 RFXANKO14593 260 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 HDAC3O15379 428 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 ZNF208O43345 1280 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 ADAM11O75078 769 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 NDUFS7O75251 213 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 ANP32DO95626 131 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 IGHV4-39P01824 125 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 DBIP07108 87 aaKnown RBP13.55□□□□□ -0.24
TPM3-219ENST00000509409 CXCR1P25024 350 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 PTAFRP25105 342 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 NTF4P34130 210 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 SLC1A3P43003 542 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 SLC16A1P53985 500 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 TNFAIP8L3Q5GJ75 292 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 COX20Q5RI15 118 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
TPM3-219ENST00000509409 C9orf135Q5VTT2 229 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 GLB1L3Q8NCI6 653 aaPredicted RBP13.55□□□□□ -0.24
TPM3-219ENST00000509409 OR52E4Q8NGH9 312 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 ADAD1Q96M93 576 aaKnown RBP13.55□□□□□ -0.24
TPM3-219ENST00000509409 THAP1Q9NVV9 213 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 GDF2Q9UK05 429 aaPredicted RBP13.55□□□□□ -0.24
TPM3-219ENST00000509409 GPR45Q9Y5Y3 372 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 SLC25A15Q9Y619 301 aa13.55□□□□□ -0.24
TPM3-219ENST00000509409 JMJD1CQ15652 2540 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 SSX4O60224 188 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 IMPDH2P12268 514 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 CRATP43155 626 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 FABP6P51161 128 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 FOXG1P55316 489 aaPredicted RBP13.54□□□□□ -0.24
TPM3-219ENST00000509409 PLAURQ03405 335 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 DMTNQ08495 405 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 EPS8Q12929 822 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 GABRA6Q16445 453 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 ATG16L1Q676U5 607 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 DTX2Q86UW9 622 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 ZNF440Q8IYI8 595 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 FBXL14Q8N1E6 418 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 MUS81Q96NY9 551 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 RHNO1Q9BSD3 238 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 CACYBPQ9HB71 228 aaKnown RBP13.54□□□□□ -0.24
TPM3-219ENST00000509409 B3GALT5Q9Y2C3 310 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 SLC9A8Q9Y2E8 581 aa13.54□□□□□ -0.24
TPM3-219ENST00000509409 ATP23Q9Y6H3 246 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms