RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 IL7RP16871 459 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 GGT1P19440 569 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 PTNP21246 168 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 ATP6V1B2P21281 511 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 SLC7A1P30825 629 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 RYKP34925 604 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 CD79BP40259 229 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 KIR2DL2P43627 348 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 SUMO3P55854 103 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 SESN3P58005 492 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 MS4A2Q01362 244 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 FAM27E3Q08E93 113 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 RBBP4Q09028 425 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 BNIP1Q12981 228 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 NRF1Q16656 503 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 TMEM176BQ3YBM2 270 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 IQCCQ4KMZ1 466 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 LIN52Q52LA3 116 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 ZNF311Q5JNZ3 666 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 WDR88Q6ZMY6 472 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 EIF3MQ7L2H7 374 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 FAM214BQ7L5A3 538 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 BTLAQ7Z6A9 289 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 VTCN1Q7Z7D3 282 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 DEFB107AQ8IZN7 70 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 OR2T12Q8NG77 320 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 OR6T1Q8NGN1 323 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 NRGNQ92686 78 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 KLHL15Q96M94 604 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 DACH2Q96NX9 599 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 CDRT15Q96T59 188 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 HOPXQ9BPY8 73 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 ECSITQ9BQ95 431 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 MED18Q9BUE0 208 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 ALG2Q9H553 416 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 RNF122Q9H9V4 155 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 FANCFQ9NPI8 374 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 CTPS2Q9NRF8 586 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 SERINC1Q9NRX5 453 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 RASSF1Q9NS23 344 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 CORO2BQ9UQ03 480 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 SLC35A3Q9Y2D2 325 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 SNX13Q9Y5W8 968 aa7.82□□□□□ -1.16
PDLIM5-213ENST00000509357 HCFC1P51610 2035 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ANKHD1Q8IWZ3 2542 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 IGKV1D-42A0A075B6H8 117 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 TMEM72A0PK05 275 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ELOVL7A1L3X0 281 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ZNF814B7Z6K7 855 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 C16orf97H3BN30 126 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 CXCR6O00574 342 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ADAMDEC1O15204 470 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 LGI1O95970 557 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 SEMG1P04279 462 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 TCN1P20061 433 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 PGCP20142 388 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 CALB2P22676 271 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 DNASE1P24855 282 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ELK4P28324 431 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ADH6P28332 368 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 PRKAR1BP31321 381 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 DNAJA1P31689 397 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 KDELR2P33947 212 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 SLC6A8P48029 635 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 IDH2P48735 452 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 LSM11P83369 360 aaKnown RBP eCLIP7.81□□□□□ -1.161e-7■■■■■ 32.8
PDLIM5-213ENST00000509357 EGR4Q05215 589 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 BNIP2Q12982 314 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 VEZF1Q14119 521 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 GNA13Q14344 377 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 DAZAP2Q15038 168 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 POU4F3Q15319 338 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 PLEKHM3Q6ZWE6 761 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 STK32CQ86UX6 486 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 CDC20BQ86Y33 519 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ADGRG3Q86Y34 549 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 PEX5LQ8IYB4 626 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ZNF610Q8N9Z0 462 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ZNF563Q8TA94 476 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 OIT3Q8WWZ8 545 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 TMEM234Q8WY98 164 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ROBO4Q8WZ75 1007 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 C3orf49Q96BT1 292 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 GMPPAQ96IJ6 420 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 MRGPRX4Q96LA9 322 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 SRXN1Q9BYN0 137 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 KLHL4Q9C0H6 718 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 OR11A1Q9GZK7 315 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ADAM19Q9H013 955 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 CACYBPQ9HB71 228 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 SPAG4Q9NPE6 437 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 GLRX2Q9NS18 164 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ACER3Q9NUN7 267 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 THUMPD1Q9NXG2 353 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 KLHL28Q9NXS3 571 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ELOVL5Q9NYP7 299 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 CALML5Q9NZT1 146 aa7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-213ENST00000509357 OSGIN1Q9UJX0 560 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms