RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SDHDO14521 159 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 ZNF500O60304 480 aaPredicted RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 SLC22A3O75751 556 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 CASP9P55211 416 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 COPZ1P61923 177 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 UFM1P61960 85 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 H3F3AP84243 136 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 FUT5Q11128 374 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 TSC22D1Q15714 1073 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 LIN52Q52LA3 116 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 PDCD4Q53EL6 469 aaKnown RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 PAQR6Q6TCH4 344 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 ABHD12BQ7Z5M8 362 aaPredicted RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 CIARTQ8N365 385 aaPredicted RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 C1orf162Q8NEQ5 155 aaPredicted RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 LILRB1Q8NHL6 650 aaPredicted RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 ZNF524Q96C55 264 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 ADAD1Q96M93 576 aaKnown RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 HS6ST2Q96MM7 605 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 SLC38A1Q9H2H9 487 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 RAD21L1Q9H4I0 556 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 UPB1Q9UBR1 384 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 MALT1Q9UDY8 824 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 DCTN4Q9UJW0 460 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 TMED7Q9Y3B3 224 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 GPR45Q9Y5Y3 372 aa12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 V9GYY5 206 aaPredicted RBP12.01□□□□□ -0.49
CCHCR1-227ENST00000508852 A0A096LPI6 279 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 OR6C65A6NJZ3 312 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 C9JVG2 144 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 SNNO75324 88 aaPredicted RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 VAMP5O95183 116 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 ANP32DO95626 131 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 TP53P04637 393 aaPredicted RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 GPIP06744 558 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 ALDOCP09972 364 aaKnown RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 ZCCHC18P0CG32 403 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 RPS4Y1P22090 263 aaKnown RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 CXCR1P25024 350 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 CRISP3P54108 245 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 CDH11P55287 796 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 DSCR9P59020 149 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 VEZF1Q14119 521 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 LARS2Q15031 903 aaKnown RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 SYPL1Q16563 259 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 DTX2Q86UW9 622 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 ZNF775Q96BV0 537 aaPredicted RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 ZG16BQ96DA0 208 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 ITCHQ96J02 903 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 MUS81Q96NY9 551 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 TRAF4Q9BUZ4 470 aaPredicted RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 MOV10Q9HCE1 1003 aaKnown RBP12□□□□□ -0.49
CCHCR1-227ENST00000508852 ZIM2Q9NZV7 527 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 OSGIN1Q9UJX0 560 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 AMDHD2Q9Y303 409 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 PRR14LQ5THK1 2151 aa12□□□□□ -0.49
CCHCR1-227ENST00000508852 TLN2Q9Y4G6 2542 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 TMEM120BA0PK00 339 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 ABCD4O14678 606 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 ERLIN1O75477 346 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 THBS1P07996 1170 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 SOD3P08294 240 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 EPHA3P29320 983 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 TACR3P29371 465 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 NME5P56597 212 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 EPS8Q12929 822 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 TNK1Q13470 666 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 MPP2Q14168 576 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 NXNQ6DKJ4 435 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 WBP2NLQ6ICG8 309 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 SEZ6L2Q6UXD5 910 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 ANKFN1Q8N957 763 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 ANKRD42Q8N9B4 389 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 POMGNT2Q8NAT1 580 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 KBTBD8Q8NFY9 601 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 CNOT9Q92600 299 aaKnown RBP11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 SLC35B4Q969S0 331 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 TMEM45BQ96B21 275 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 MAELQ96JY0 434 aaKnown RBP11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 ARL5BQ96KC2 179 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 TAPBPLQ9BX59 468 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 ADAM19Q9H013 955 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 MANSC1Q9H8J5 431 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 FKRPQ9H9S5 495 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 POU2F3Q9UKI9 436 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 IFT52Q9Y366 437 aa11.99□□□□□ -0.49
CCHCR1-227ENST00000508852 A0A0G2JPF8 293 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 PRAMEF27A3QJZ7 478 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 CDHR4A6H8M9 788 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 HNRNPCL2B2RXH8 293 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 HNRNPCL3B7ZW38 293 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 HNRNPCL1O60812 293 aaKnown RBP11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 RAD51DO75771 328 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 WNT11O96014 354 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 CHRM4P08173 479 aa11.98□□□□□ -0.49
CCHCR1-227ENST00000508852 HNRNPCL4P0DMR1 293 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms