RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CLRN1P58418 232 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 ADAM8P78325 824 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 CYHR1Q6ZMK1 362 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 C8orf86Q6ZUL3 223 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 NUFIP2Q7Z417 695 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 SPRED2Q7Z698 418 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 NRMQ8IXM6 262 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 FAM126BQ8IXS8 530 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 NPEPL1Q8NDH3 523 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 OR52I1Q8NGK6 324 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 APH1AQ96BI3 265 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 SERPINB12Q96P63 405 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 GPR78Q96P69 363 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 MAP3K3Q99759 626 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 NMUR1Q9HB89 426 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 DUSP22Q9NRW4 184 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 GIN1Q9NXP7 522 aa6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 MRPS28Q9Y2Q9 187 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 RBM8AQ9Y5S9 174 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-206ENST00000508170 A0A1B0GTI1 187 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 H3BNH8 94 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 SGCEO43556 437 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 RAMP3O60896 148 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 MBPP02686 304 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 ATP1A1P05023 1023 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 THRAP10827 490 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 MATN1P21941 496 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 EPHA2P29317 976 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 CNR2P34972 360 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 UBE2MP61081 183 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 FAM3AP98173 230 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 IL10RBQ08334 325 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 EIF4HQ15056 248 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 CDKN3Q16667 212 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 RFX4Q33E94 735 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 TIMM23BQ5SRD1 257 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 TRIQKQ629K1 86 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 CEACAM20Q6UY09 585 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 SV2AQ7L0J3 742 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 TIPARPQ7Z3E1 657 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 ANKRD33Q7Z3H0 272 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 TRAPPC5Q8IUR0 188 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 EID3Q8N140 333 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 OR5M3Q8NGP4 307 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 ATG4AQ8WYN0 398 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 SCRN2Q96FV2 425 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF285Q96NJ3 590 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 GFI1Q99684 422 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 ZFP64Q9NPA5 681 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 TMEM9Q9P0T7 183 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 TESMINQ9Y4I5 508 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 CPQQ9Y646 472 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 LTBP4Q8N2S1 1624 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 CEMIPQ8WUJ3 1361 aa6.79□□□□□ -1.32
PDGFRA-206ENST00000508170 A0A0U1RQF3 1178 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TEX51A0A1B0GUA7 166 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TMEM200CA6NKL6 621 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 CHEK1O14757 476 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ANGPTL1O95841 491 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 CDK1P06493 297 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ZNF43P17038 809 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 KITLGP21583 273 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 CSKP41240 450 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 GYG1P46976 350 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 PRKXP51817 358 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 UBE2V1Q13404 147 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 GAB1Q13480 694 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 C1orf61Q13536 156 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 RAB31Q13636 194 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 GRB7Q14451 532 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 SLC1A5Q15758 541 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 HLA-BQ31612 363 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ELOA3BQ3SY89 546 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 VPS26BQ4G0F5 336 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 LPCAT4Q643R3 524 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ZFP1Q6P2D0 407 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 RPTNQ6XPR3 784 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ACOT7LQ6ZUV0 252 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TFAP2DQ7Z6R9 452 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 HPS6Q86YV9 775 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 LACC1Q8IV20 430 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 PLA2G15Q8NCC3 412 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 PXT1Q8NFP0 134 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ELOA3Q8NG57 546 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 OR4D10Q8NGI6 311 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 ADAMTS14Q8WXS8 1223 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 KCTD12Q96CX2 325 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TSSK2Q96PF2 358 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 LGMNQ99538 433 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 C12orf57Q99622 126 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 LAT2Q9GZY6 243 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 SYT4Q9H2B2 425 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 NANSQ9NR45 359 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 TEX10Q9NXF1 929 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 RWDD2AQ9UIY3 292 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 KCNG2Q9UJ96 466 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 A0A1B0GV90 55 aa6.78□□□□□ -1.32
PDGFRA-206ENST00000508170 H0YL77 283 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms