RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 Q9N2J8 555 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 ISYNA1Q9NPH2 558 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 BABAM2Q9NXR7 383 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 C17orf105B2RV13 164 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 CLDN4O14493 209 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 RNF13O43567 381 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 FMO6PO60774 539 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 HLA-DQB1P01920 261 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 SLC2A2P11168 524 aaPredicted RBP13.3□□□□□ -0.28
DDX41-208ENST00000507955 SHC1P29353 583 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 NAA10P41227 235 aaPredicted RBP13.3□□□□□ -0.28
DDX41-208ENST00000507955 TDGQ13569 410 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 FGFBP1Q14512 234 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 COL19A1Q14993 1142 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 TATDN3Q17R31 274 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 APOOLQ6UXV4 268 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 SYT9Q86SS6 491 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 ZSCAN1Q8NBB4 408 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 ENKURQ8TC29 256 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 ADGRL4Q9HBW9 690 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 KLHL1Q9NR64 748 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 IER3IP1Q9Y5U9 82 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 RIIAD1A6NNX1 92 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 GTPBP1O00178 669 aaKnown RBP13.3□□□□□ -0.28
DDX41-208ENST00000507955 PSMD9O00233 223 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 NSA2O95478 260 aaKnown RBP13.3□□□□□ -0.28
DDX41-208ENST00000507955 CLPSP04118 112 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 HLA-DPB1P04440 258 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 PSKH1P11801 424 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 MAP2K3P46734 347 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 CTBP2P56545 445 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 OR10A3P58181 314 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 EFR3AQ14156 821 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 QPRTQ15274 297 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 YIF1BQ5BJH7 314 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 LCN1P1Q5VSP4 162 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 MED25Q71SY5 747 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 NANOGNBQ7Z5D8 188 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 GID4Q8IVV7 300 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 ZNF615Q8N8J6 731 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 FAM98AQ8NCA5 519 aaKnown RBP13.3□□□□□ -0.28
DDX41-208ENST00000507955 OR5J2Q8NH18 312 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 OR52N1Q8NH53 320 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 OR5W2Q8NH69 310 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 DNAJA4Q8WW22 397 aaPredicted RBP13.3□□□□□ -0.28
DDX41-208ENST00000507955 SMPDL3BQ92485 455 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 UPRTQ96BW1 309 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 ZNF426Q9BUY5 554 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 OR8D2Q9GZM6 311 aa13.3□□□□□ -0.28
DDX41-208ENST00000507955 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
DDX41-208ENST00000507955 NPIPB9F8W1W9 429 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 HCN1O60741 890 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 PRAMEF2O60811 474 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 WISP1O95388 367 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 SBK2P0C263 348 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 GLULP15104 373 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 CD27P26842 260 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 PPP3R1P63098 170 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 GALK2Q01415 458 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 ZNF85Q03923 595 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 TP53I3Q53FA7 332 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 ZNF595Q8IYB9 648 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 YIPF7Q8N8F6 280 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 C7orf57Q8NEG2 295 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 AP3S1Q92572 193 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 RTN4RQ9BZR6 473 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 NLKQ9UBE8 527 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 RPS6KB2Q9UBS0 482 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 SLC35A3Q9Y2D2 325 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 ALG5Q9Y673 324 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 ARID1BQ8NFD5 2236 aaPredicted RBP13.29□□□□□ -0.28
DDX41-208ENST00000507955 CACNA1CQ13936 2221 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 EVX1P49640 407 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 ATP12AP54707 1039 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 VWA2Q5GFL6 755 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 RTL4Q6ZR62 310 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 PRR23CQ6ZRP0 262 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 GKN2Q86XP6 184 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 PTPMT1Q8WUK0 201 aaPredicted RBP13.29□□□□□ -0.28
DDX41-208ENST00000507955 NMNAT3Q96T66 252 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 MESP1Q9BRJ9 268 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 PHF7Q9BWX1 381 aaPredicted RBP13.29□□□□□ -0.28
DDX41-208ENST00000507955 PDE7BQ9NP56 450 aa13.29□□□□□ -0.28
DDX41-208ENST00000507955 SERINC4A6NH21 518 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 TFP02787 698 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 YES1P07947 543 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 PEPDP12955 493 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 PRKCAP17252 672 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 SLC2A5P22732 501 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 GRPRP30550 384 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 PYCR1P32322 319 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 RPL4P36578 427 aaKnown RBP13.28□□□□□ -0.28
DDX41-208ENST00000507955 IL18Q14116 193 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 GALEQ14376 348 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 IDNKQ5T6J7 187 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 ULK3Q6PHR2 472 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 POMZP3Q6PJE2 187 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 SHISA6Q6ZSJ9 500 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms