RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 UGT1A5P35504 534 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 PTGDSP41222 190 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 CCT3P49368 545 aaKnown RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 CEBPDP49716 269 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 PKNOX1P55347 436 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 RPS14P62263 151 aaKnown RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 CSNK1G2P78368 415 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 ORC2Q13416 577 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 NSUN5P1Q3KNT7 163 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 KLF17Q5JT82 389 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 C1orf220Q5T0J3 134 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 TGIF2LYQ8IUE0 185 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 ERI1Q8IV48 349 aaKnown RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 FTMTQ8N4E7 242 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 OR5D13Q8NGL4 314 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 SETD7Q8WTS6 366 aaKnown RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 DNAJA4Q8WW22 397 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 CHCHD10Q8WYQ3 142 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 UBE2E3Q969T4 207 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 PARD6BQ9BYG5 372 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 POLR2J2Q9GZM3 115 aaKnown RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 POLR2J3Q9H1A7 115 aaKnown RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 OR51J1Q9H342 316 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 PDFQ9HBH1 243 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 POLE4Q9NR33 117 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 TREM2Q9NZC2 230 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 ADAM22Q9P0K1 906 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 ZNF256Q9Y2P7 627 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 SH3TC1Q8TE82 1336 aa2.86□□□□□ -1.95
HMGB1P28-201ENST00000507778 DCTN6O00399 190 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 EMC8O43402 210 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 MED7O43513 233 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 PRKAB2O43741 272 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 UGT1A9O60656 530 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 ATP5LO75964 103 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 LGI1O95970 557 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 ACTL6AO96019 429 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 IL1BP01584 269 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 RBMY1CP0DJD4 496 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 HTR1FP30939 366 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 APOC4P55056 127 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 TIMM10P62072 90 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 ASPHQ12797 758 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 KLRB1Q12918 225 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 SLC15A2Q16348 729 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 DMRTC1Q5HYR2 192 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 OTPQ5XKR4 325 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 C11orf71Q6IPW1 123 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 EFL1Q7Z2Z2 1120 aaKnown RBP2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 MFSD9Q8NBP5 474 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 BHLHE23Q8NDY6 225 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 C7orf33Q8WU49 177 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 SCFD1Q8WVM8 642 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 FRAT1Q92837 279 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 PAGE5Q96GU1 130 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 ZIM3Q96PE6 472 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 SLC38A2Q96QD8 506 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 CLCC1Q96S66 551 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 SECISBP2Q96T21 854 aaKnown RBP2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 HIST1H4GQ99525 98 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 ZBTB18Q99592 522 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 SLC39A3Q9BRY0 314 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 SELENOIQ9C0D9 397 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 RBKSQ9H477 322 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 REEP4Q9H6H4 257 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 NARFLQ9H6Q4 476 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 SUDS3Q9H7L9 328 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 NHEJ1Q9H9Q4 299 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 FOLH1BQ9HBA9 442 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 COX16Q9P0S2 106 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 ADAM28Q9UKQ2 775 aa2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 NAP1L2Q9ULW6 460 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P28-201ENST00000507778 A0A0J9YXY3 114 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 IQANK1A0A1B0GTG1 560 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 FAM231BA6NCW3 169 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 A8MXQ7 604 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 MPHOSPH10O00566 681 aaKnown RBP2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 HCRTR1O43613 425 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 STAMBPO95630 424 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 DNAH10OSP0CZ25 163 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 NCK1P16333 377 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 ATP6V1B2P21281 511 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 COX7A1P24310 79 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 CCR1P32246 355 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 RDXP35241 583 aaKnown RBP2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 SSR1P43307 286 aaKnown RBP2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 MAGEA8P43361 318 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 HLCSP50747 726 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 GRB7Q14451 532 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 HERPUD1Q15011 391 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 KLHL38Q2WGJ6 581 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 CCDC14Q49A88 953 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 SAMD4BQ5PRF9 694 aaKnown RBP2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 PDZK1Q5T2W1 519 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 GPRC6AQ5T6X5 926 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 C1orf146Q5VVC0 180 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 HSDL2Q6YN16 418 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 SH2D6Q7Z4S9 175 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 LRRC75A-AS1Q8N1F1 130 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 CCDC71LQ8N9Z2 235 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms