RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 C6orf120Q7Z4R8 191 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 ADGRG3Q86Y34 549 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 HOMEZQ8IX15 550 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 IFT20Q8IY31 132 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 CLECL1Q8IZS7 167 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 FNDC5Q8NAU1 212 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 SLC35G5Q96KT7 338 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 FOXN4Q96NZ1 517 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 SOX7Q9BT81 388 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
TSPAN17-206ENST00000507471 MALRD1Q5VYJ5 2156 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 RNF103-CHMP3A0A140T963 221 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 LOC390937A0A1W2PQ73 354 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 SMIM23A6NLE4 172 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 NPHS1O60500 1241 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 TGFAP01135 160 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 PGRP06401 933 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 CCNA2P20248 432 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 FKBP2P26885 142 aaKnown RBP12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 ALDH3A1P30838 453 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 PRPS1P60891 318 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 TGFBR3Q03167 851 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 SLC17A1Q14916 467 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 CARTPTQ16568 116 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 LIPNQ5VXI9 398 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 TYW3Q6IPR3 259 aaKnown RBP12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 ANKS4BQ8N8V4 417 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 MECRQ9BV79 373 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 BPESC1Q9GZL8 116 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 OR51I1Q9H343 314 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 MYOZ1Q9NP98 299 aaPredicted RBP12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 EXD2Q9NVH0 621 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 PARPBPQ9NWS1 579 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 TMEM181Q9P2C4 612 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 TRAPPC4Q9Y296 219 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 SLC9A8Q9Y2E8 581 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 WDR45Q9Y484 360 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 ANK2Q01484 3957 aa12.08□□□□□ -0.48
TSPAN17-206ENST00000507471 CLDN24A6NM45 220 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 SKAP2O75563 359 aaPredicted RBP12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 WNT11O96014 354 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 IMPDH2P12268 514 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 ZNF23P17027 643 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 MPGP29372 298 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 SNRPD2P62316 118 aaKnown RBP12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 FUT5Q11128 374 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 CR1LQ2VPA4 569 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 PGS1Q32NB8 556 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 IQCCQ4KMZ1 466 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 C1QTNF12Q5T7M4 302 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 HMGN2P46Q86SG4 172 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 GSPT2Q8IYD1 628 aaKnown RBP12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 MIPOL1Q8TD10 442 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 EPS8L3Q8TE67 593 aaKnown RBP12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 OIT3Q8WWZ8 545 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 VRK1Q99986 396 aaPredicted RBP12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 SAP130Q9H0E3 1048 aa12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 EXOSC3Q9NQT5 275 aaKnown RBP12.07□□□□□ -0.48
TSPAN17-206ENST00000507471 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 KLF11O14901 512 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 EIF1BO60739 113 aaKnown RBP12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 GUSBP08236 651 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 OR12D1P0DN82 309 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 G6PDP11413 515 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 CDH2P19022 906 aaPredicted RBP12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 ARRB2P32121 409 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 IDH2P48735 452 aaKnown RBP12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 SLC35A1P78382 337 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 KCNJ10P78508 379 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 HIKESHIQ53FT3 197 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 OR4F3Q6IEY1 312 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 FRRS1Q6ZNA5 592 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 ZCCHC23Q6ZST2 131 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 SLC46A3Q7Z3Q1 461 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 RFLNBQ8N5W9 214 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 ARFGAP2Q8N6H7 521 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 XAGE5Q8WWM1 108 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 RAB8BQ92930 207 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 DDIT4LQ96D03 193 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 ZG16BQ96DA0 208 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 C1orf159Q96HA4 380 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 BOD1Q96IK1 185 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 NAA11Q9BSU3 229 aaPredicted RBP12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 POLE3Q9NRF9 147 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 CA10Q9NS85 328 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 PCDHGB4Q9UN71 923 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
TSPAN17-206ENST00000507471 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
TSPAN17-206ENST00000507471 TMED7-TICAM2A0A0A6YYA0 188 aa12.05□□□□□ -0.48
TSPAN17-206ENST00000507471 TMEM72A0PK05 275 aa12.05□□□□□ -0.48
TSPAN17-206ENST00000507471 ZC3H12DA2A288 527 aaKnown RBP12.05□□□□□ -0.48
TSPAN17-206ENST00000507471 LRP5LA4QPB2 252 aa12.05□□□□□ -0.48
TSPAN17-206ENST00000507471 RNASET2O00584 256 aaKnown RBP12.05□□□□□ -0.48
TSPAN17-206ENST00000507471 AP3D1O14617 1153 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms