RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GOLGA8OA6NCC3 632 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF716A6NP11 495 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 GOLGA8NF8WBI6 632 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 OVOL3O00110 214 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 LYZL6O75951 148 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 PLAUP00749 431 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 THBS1P07996 1170 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 IGHV1-2P23083 117 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 PTAFRP25105 342 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 OR2B6P58173 313 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 H3F3AP84243 136 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 PPP2R2BQ00005 443 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 LARS2Q15031 903 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 STK11Q15831 433 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 SYPL1Q16563 259 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 PAQR6Q6TCH4 344 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 DEPDC4Q8N2C3 294 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 C17orf78Q8N4C9 275 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF433Q8N7K0 673 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 ANKFN1Q8N957 763 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 C1orf162Q8NEQ5 155 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 CNOT9Q92600 299 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC35B4Q969S0 331 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 ZG16BQ96DA0 208 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 TEX37Q96LM6 180 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 SF3B5Q9BWJ5 86 aaKnown RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 WDR55Q9H6Y2 383 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 SDR39U1Q9NRG7 319 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 OSGIN1Q9UJX0 560 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 IFT52Q9Y366 437 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 PRAMEF27A3QJZ7 478 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 UBDO15205 165 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 VAMP5O95183 116 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 LY6G6DO95868 133 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 GPIP06744 558 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 CHRM4P08173 479 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 DANCRP0C864 163 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 CXCR1P25024 350 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 TACR3P29371 465 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 IL12AP29459 219 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 NME5P56597 212 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 IRX1P78414 480 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 BSPH1Q075Z2 132 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 EPS8Q12929 822 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 TSC22D1Q15714 1073 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 NRF1Q16656 503 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 MRPL2Q5T653 305 aaKnown RBP12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 RNF220Q5VTB9 566 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 AGAP6Q5VW22 663 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 PRAMEF8Q5VWM4 474 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 PRAMEF7Q5VXH5 474 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 OLIG3Q7RTU3 272 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 ABHD12BQ7Z5M8 362 aaPredicted RBP12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 INPP5KQ9BT40 448 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 TRIM2Q9C040 744 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 ADAM19Q9H013 955 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 TPT1P8Q9HAU6 139 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 UPB1Q9UBR1 384 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 DCTN4Q9UJW0 460 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 PRR14LQ5THK1 2151 aa12.74□□□□□ -0.37
HMGCS1-203ENST00000507004 HIVEP2P31629 2446 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 A0A0G2JPF8 293 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 CDHR4A6H8M9 788 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 DPRXA6NFQ7 191 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 OR6C65A6NJZ3 312 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 HNRNPCL2B2RXH8 293 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 HNRNPCL3B7ZW38 293 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 HNRNPCL1O60812 293 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 HNRNPCL4P0DMR1 293 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 KITP10721 976 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 CDKN2CP42773 168 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 CRATP43155 626 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 DSTNP60981 165 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 STX1BP61266 288 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 MAGOHP61326 146 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 FADDQ13158 208 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 WBP2NLQ6ICG8 309 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 DTX2Q86UW9 622 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 MIER2Q8N344 545 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 OR52P1PQ8NH57 321 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 MGARPQ8TDB4 240 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 TMEM45BQ96B21 275 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 MUS81Q96NY9 551 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 SMR3AQ99954 134 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 TAPBPLQ9BX59 468 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 MOV10Q9HCE1 1003 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 TMEM45AQ9NWC5 275 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 CISD1Q9NZ45 108 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 AMDHD2Q9Y303 409 aa12.73□□□□□ -0.37
HMGCS1-203ENST00000507004 CADP27708 2225 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 TRIM64A6NGJ6 449 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 TRIM64BA6NI03 449 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 CLDN24A6NM45 220 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 A8MVM7 634 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 C9JVG2 144 aa12.72□□□□□ -0.37
HMGCS1-203ENST00000507004 BCAS1O75363 584 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms