RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 EQTNQ9NQ60 294 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 C20orf141Q9NUB4 165 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 DUX4Q9UBX2 424 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 FBXL4Q9UKA2 621 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 UBE2QL1A1L167 161 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 H7C2Y5 167 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 EMC8O43402 210 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 CTSLP07711 333 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 CLTBP09497 229 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 SRMP19623 302 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 PDX1P52945 283 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 GMFBP60983 142 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 WDR88Q6ZMY6 472 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 C11orf96Q7Z7L8 435 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 COA4Q9NYJ1 87 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 ACTR10Q9NZ32 417 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 SPG21Q9NZD8 308 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 LRFN2Q9ULH4 789 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF443Q9Y2A4 671 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 HEATR5BQ9P2D3 2071 aa15.78■□□□□ 0.12
SQSTM1-211ENST00000506690 OR1F1O43749 312 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 POP7O75817 140 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 CD1AP06126 327 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 PSMB5P28074 263 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF136P52737 540 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 ART1P52961 327 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 SIRPAP78324 504 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 C9orf64Q5T6V5 341 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 OR2AK2Q8NG84 335 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 OR10K1Q8NGX5 313 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 PFN4Q8NHR9 129 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 S100A16Q96FQ6 103 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 SEMA4CQ9C0C4 833 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 PITHD1Q9GZP4 211 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 RASL12Q9NYN1 266 aa15.77■□□□□ 0.12
SQSTM1-211ENST00000506690 A0A1W2PS29 197 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF879B4DU55 563 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 ACOT7O00154 380 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 MAGEB4O15481 346 aaPredicted RBP15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 LCMT2O60294 686 aaKnown RBP15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 RCBTB2O95199 551 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 PTHLHP12272 177 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 AKR1D1P51857 326 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 EPHB3P54753 998 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC7A9P82251 487 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 SCRN3Q0VDG4 424 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 POU4F2Q12837 409 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 CRMP1Q14194 572 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 HFEQ30201 348 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM69Q5SWH9 247 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 DCAF12L2Q5VW00 463 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 FCRLBQ6BAA4 426 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 RPL13AP3Q6NVV1 102 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 DCUN1D3Q8IWE4 304 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 RNF113BQ8IZP6 322 aaKnown RBP15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 NUP43Q8NFH3 380 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 BPIFCQ8NFQ6 507 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 OR2L2Q8NH16 312 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 TTTY10Q9BZA0 68 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 MFFQ9GZY8 342 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC39A1Q9NY26 324 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 CLDND1Q9NY35 253 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 DENND4AQ7Z401 1863 aa15.77■□□□□ 0.11
SQSTM1-211ENST00000506690 RIIAD1A6NNX1 92 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 K7ESM1 405 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 PIN1P1O15428 100 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 EIF4E2O60573 245 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 FMO6PO60774 539 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 MNDAP41218 407 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 MC3RP41968 323 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 CBFBQ13951 182 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 MPPED2Q15777 294 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 POM121L1PQ3SYA9 428 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 STPG1Q5TH74 334 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 PWWP2BQ6NUJ5 590 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 FRRS1Q6ZNA5 592 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 DNM1P46Q6ZS02 220 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM17Q86X19 198 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 CRIPAKQ8N1N5 446 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 SYS1Q8N2H4 156 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 PHYHIPQ92561 330 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 NSMAFQ92636 917 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 ARMC5Q96C12 935 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 DTD2Q96FN9 168 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 PBX4Q9BYU1 374 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF304Q9HCX3 659 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 NOX4Q9NPH5 578 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 A0A1W2PR48 441 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 LRIT2A6NDA9 550 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 F8W036 122 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM127O75204 238 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 PAPLNO95428 1278 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 GYPBP06028 91 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 RAB40ALP0C0E4 278 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 C8orf89P0DMQ9 161 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 ARHGDIBP52566 201 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 HCCSP53701 268 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 GPR85P60893 370 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 ARHGAP19Q14CB8 494 aa15.76■□□□□ 0.11
SQSTM1-211ENST00000506690 C18orf63Q68DL7 685 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms