RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 HOXC5Q00444 222 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 LTBQ06643 244 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 FBXL19-AS1Q494R0 122 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 GTF2IRD2BQ6EKJ0 949 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 WBP2NLQ6ICG8 309 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 DHRS4L2Q6PKH6 230 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 FCRLAQ7L513 359 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 NET1Q7Z628 596 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-209ENST00000506630 GTF2IRD2Q86UP8 949 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 ADGRG3Q86Y34 549 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 ARMC8Q8IUR7 673 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 SLC30A8Q8IWU4 369 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 RNF128Q8TEB7 428 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 ABHD3Q8WU67 409 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 DDIT4LQ96D03 193 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 STARD4Q96DR4 205 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 GMPPAQ96IJ6 420 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-209ENST00000506630 RBM24Q9BX46 236 aaKnown RBP11.71□□□□□ -0.53
TCOF1-209ENST00000506630 OR11A1Q9GZK7 315 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 LIME1Q9H400 295 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 DLL4Q9NR61 685 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 JKAMPQ9P055 326 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 SLC13A4Q9UKG4 626 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 PROCRQ9UNN8 238 aa11.71□□□□□ -0.53
TCOF1-209ENST00000506630 PRORSD1PA6NEY8 169 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 SYT5O00445 386 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 MSTNO14793 375 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 AIM2O14862 343 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 SS18L1O75177 396 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 NPPAP01160 153 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 PCGF2P35227 344 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 PEX19P40855 299 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 KIR2DL3P43628 341 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 PCBP3P57721 371 aaKnown RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 RAC3P60763 192 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 NCALDP61601 193 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 CSNK2A1P68400 391 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 RNPS1Q15287 305 aaKnown RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 GUSBP1Q15486 140 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 GLIPR1L2Q4G1C9 344 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 INTS11Q5TA45 600 aaKnown RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 TMPPEQ6ZT21 453 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 BTLAQ7Z6A9 289 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 TREML1Q86YW5 311 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 SMYD1Q8NB12 490 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 BHLHE22Q8NFJ8 381 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 GPATCH1Q9BRR8 931 aaKnown RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 OPN3Q9H1Y3 402 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-209ENST00000506630 GLRX2Q9NS18 164 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 RASSF1Q9NS23 344 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 KLHL28Q9NXS3 571 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 GALNT8Q9NY28 637 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 RPS6KB2Q9UBS0 482 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 HDGFL3Q9Y3E1 203 aa11.7□□□□□ -0.54
TCOF1-209ENST00000506630 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-209ENST00000506630 ACANP16112 2415 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 M0QX08 132 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 TPST1O60507 370 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 FESP07332 822 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 ENPP1P22413 925 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 CXCR1P25024 350 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 FKBP2P26885 142 aaKnown RBP11.69□□□□□ -0.54
TCOF1-209ENST00000506630 AGTR1P30556 359 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 GZMMP51124 257 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 RGS8P57771 180 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-209ENST00000506630 ADAM8P78325 824 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 DMTNQ08495 405 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 VMACQ2NL98 169 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 TMEM201Q5SNT2 666 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 PATL1Q86TB9 770 aaKnown RBP11.69□□□□□ -0.54
TCOF1-209ENST00000506630 COMTD1Q86VU5 262 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 KIF18BQ86Y91 864 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 OR6K3Q8NGY3 331 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 SLC35B4Q969S0 331 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 C3orf49Q96BT1 292 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 ZHX1-C8orf76Q96EF9 292 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 ARL5BQ96KC2 179 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 RSPO3Q9BXY4 272 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-209ENST00000506630 ADAM19Q9H013 955 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 MYLK2Q9H1R3 596 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 C12orf49Q9H741 205 aa11.69□□□□□ -0.54
TCOF1-209ENST00000506630 TESQ9UGI8 421 aaKnown RBP11.69□□□□□ -0.54
TCOF1-209ENST00000506630 ZC3H12DA2A288 527 aaKnown RBP11.68□□□□□ -0.54
TCOF1-209ENST00000506630 A8MXE2 369 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 FAM220BPB1ANY3 271 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 SMAD9O15198 467 aaKnown RBP11.68□□□□□ -0.54
TCOF1-209ENST00000506630 ZNF208O43345 1280 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 PRKD3O94806 890 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 MFN2O95140 757 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 PMS2P2O95744 297 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 CGAP01215 116 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 CD8BP10966 210 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 KCNJ5P48544 419 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 CLK1P49759 484 aaKnown RBP11.68□□□□□ -0.54
TCOF1-209ENST00000506630 NUDT2P50583 147 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms