RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TPK1Q9H3S4 243 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 NDUFB11Q9NX14 153 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 ERVK13-1Q9NX77 482 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 EML6Q6ZMW3 1958 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 PMS2P1A4D2B8 440 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 MASP2O00187 686 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 TACR3P29371 465 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 RPS19P39019 145 aaKnown RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 RBM34P42696 430 aaKnown RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 FBXW4P57775 412 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 BIKQ13323 160 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 USP43Q70EL4 1123 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 SLC29A4Q7RTT9 530 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 RABEPKQ7Z6M1 372 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 PPP1R3BQ86XI6 285 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 CENPSQ8N2Z9 138 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 NFAM1Q8NET5 270 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 NLGN4YQ8NFZ3 816 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 PPP1R14BQ96C90 147 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 COX4I2Q96KJ9 171 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 BARHL1Q9BZE3 327 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 MED17Q9NVC6 651 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 H2AFY2Q9P0M6 372 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 TNFRSF10DQ9UBN6 386 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 ICAM5Q9UMF0 924 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 SIRT4Q9Y6E7 314 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 TMEM200CA6NKL6 621 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ELOA3DA6NLF2 546 aaPredicted RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 C12orf71A8MTZ7 269 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 D6RAR5 112 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 BLOC1S5-TXNDC5H3BN57 136 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 J3QRE1 110 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ALOX12BO75342 701 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ITPKBP27987 946 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 AQP2P41181 271 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ERVK-25P63136 954 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 DCDP81605 110 aaKnown RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 ELOA3BQ3SY89 546 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 CCDC157Q569K6 752 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 RNLSQ5VYX0 342 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 MEPCEQ7L2J0 689 aaKnown RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 SSX6Q7RTT6 188 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ZNF527Q8NB42 609 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 DTWD2Q8NBA8 298 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ELOA3Q8NG57 546 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ZNF563Q8TA94 476 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 DNAJA4Q8WW22 397 aaPredicted RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 KCNS3Q9BQ31 491 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 TGIF2Q9GZN2 237 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 GALNT9Q9HCQ5 603 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 CHRNA9Q9UGM1 479 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 CFL2Q9Y281 166 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 EXOGQ9Y2C4 368 aaKnown RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 FAM171A2A8MVW0 826 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 PRR23D1E9PI22 279 aaPredicted RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 M0R296 226 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 NDUFB5O43674 189 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 NUDT14O95848 222 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 CELA2AP08217 269 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 PRR23D2P0DMB1 279 aaPredicted RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 UGT2B10P36537 528 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 C1DQ13901 141 aaKnown RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 INAQ16352 499 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ZNF404Q494X3 552 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 YOD1Q5VVQ6 348 aaPredicted RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 VASNQ6EMK4 673 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 C22orf42Q6IC83 251 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 WBP2NLQ6ICG8 309 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 PAPD4Q6PIY7 484 aaKnown RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 RTL4Q6ZR62 310 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 C10orf53Q8N6V4 93 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 NAT6Q93015 286 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 RFKQ969G6 155 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 NMNAT3Q96T66 252 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 TEAD3Q99594 435 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ARHGAP9Q9BRR9 750 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 ASPNQ9BXN1 380 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 TEX12Q9BXU0 123 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 MARCH7Q9H992 704 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 SF3B6Q9Y3B4 125 aaKnown RBP11.12□□□□□ -0.63
LIN54-206ENST00000506560 EXPH5Q8NEV8 1989 aa11.12□□□□□ -0.63
LIN54-206ENST00000506560 TMEM129A0AVI4 362 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TTC36A6NLP5 189 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 CTDSP2O14595 271 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 CDC40O60508 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
LIN54-206ENST00000506560 IGHA1P01876 353 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 F13BP05160 661 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 OCM2P0CE71 109 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 OCMP0CE72 109 aaPredicted RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 CPEP16870 476 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 ENDOUP21128 410 aaKnown RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 SLC2A5P22732 501 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 RPL4P36578 427 aaKnown RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 ADH7P40394 386 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 KLBQ86Z14 1044 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 OR10H4Q8NGA5 316 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 ZMYND19Q96E35 227 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms