RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 HPCAP84074 193 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 BSPH1Q075Z2 132 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 LRRC74AQ0VAA2 488 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 STK11Q15831 433 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 ZNF672Q499Z4 452 aaPredicted RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 MRPL2Q5T653 305 aaKnown RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 CLIP4Q8N3C7 705 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 SLC38A5Q8WUX1 472 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 WDR60Q8WVS4 1066 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 PMM1Q92871 262 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 VPS33AQ96AX1 596 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 AURKBQ96GD4 344 aaPredicted RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 BDH2Q9BUT1 245 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 RSPO3Q9BXY4 272 aaPredicted RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 TPT1P8Q9HAU6 139 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 NKIRAS1Q9NYS0 192 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 NPAP1Q9NZP6 1156 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 ZIM2Q9NZV7 527 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 CFAP73A6NFT4 308 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 FAAHO00519 579 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 KLF11O14901 512 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 UBDO15205 165 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 ZNF208O43345 1280 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 CD8AP01732 235 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 HEXAP06865 529 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 CRATP43155 626 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 HTR3AP46098 478 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 POLR2HP52434 150 aaKnown RBP12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 POLR2JP52435 117 aaKnown RBP12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 SLC16A1P53985 500 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 PPA1Q15181 289 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 GSTA3Q16772 222 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 PGGHGQ32M88 737 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 TIMM23BQ5SRD1 257 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 EPGNQ6UW88 154 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 DNAJC14Q6Y2X3 702 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 OR52P1PQ8NH57 321 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 SMAP2Q8WU79 429 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 GTF2H4Q92759 462 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 POTEKPQ9BYX7 375 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 TRIM2Q9C040 744 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 ESRP2Q9H6T0 727 aaKnown RBP12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 NGBQ9NPG2 151 aa12.69□□□□□ -0.38
CDC42SE2-209ENST00000506419 DSPPQ9NZW4 1301 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 CDHR4A6H8M9 788 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 SHISA9B4DS77 424 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 DNPH1O43598 174 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 TMCC2O75069 709 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 NUDT7P0C024 238 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 PRG2P13727 222 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 GGT1P19440 569 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 MAGEA8P43361 318 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 ANXA11P50995 505 aaKnown RBP12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 ATP5J2P56134 94 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 SLC17A1Q14916 467 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 RPS26P11Q5JNZ5 115 aaPredicted RBP12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 ZNF836Q6ZNA1 936 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 FUNDC1Q8IVP5 155 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 PEX5LQ8IYB4 626 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 UBE2J2Q8N2K1 259 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 ZIC4Q8N9L1 334 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 WDR31Q8NA23 367 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 OR52E4Q8NGH9 312 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 ITCHQ96J02 903 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 MUS81Q96NY9 551 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 PAIP1Q9H074 479 aaKnown RBP12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 CXorf56Q9H5V9 222 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 EMC3Q9P0I2 261 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 PCDHB14Q9Y5E9 798 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 FLVCR1Q9Y5Y0 555 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 TLN2Q9Y4G6 2542 aa12.68□□□□□ -0.38
CDC42SE2-209ENST00000506419 A0A1W2PR80 420 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 PDLIM1O00151 329 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 GPR171O14626 319 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 MRPL33O75394 65 aaKnown RBP12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 THBS1P07996 1170 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 HOXB9P17482 250 aaPredicted RBP12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 PTNP21246 168 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 DSTNP60981 165 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 RPS4XP62701 263 aaKnown RBP12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 SLC35A1P78382 337 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 FAPQ12884 760 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 BNIP2Q12982 314 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 TNK1Q13470 666 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 CEACAM7Q14002 265 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 GNA13Q14344 377 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 GABRA6Q16445 453 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 SLC2A7Q6PXP3 512 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 MSANTD1Q6ZTZ1 278 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
CDC42SE2-209ENST00000506419 MIER2Q8N344 545 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms