RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ROS1P08922 2347 aa9.27□□□□□ -0.93
NR1I3-222ENST00000506018 IGHV3-15A0A0B4J1V0 119 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF724A8MTY0 619 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 HMGN4O00479 90 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 RFXANKO14593 260 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 GPR171O14626 319 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 SIAH2O43255 324 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 DNPH1O43598 174 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 CYTIPO60759 359 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 CNOT4O95628 575 aaKnown RBP9.26□□□□□ -0.93
NR1I3-222ENST00000506018 DBIP07108 87 aaKnown RBP9.26□□□□□ -0.93
NR1I3-222ENST00000506018 RYKP34925 604 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 MAP2K6P52564 334 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 CAPRIN1Q14444 709 aaKnown RBP9.26□□□□□ -0.93
NR1I3-222ENST00000506018 ZSCAN26Q16670 478 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 COQ5Q5HYK3 327 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 Q5PR19 223 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 SFRP5Q5T4F7 317 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 AP1ARQ63HQ0 302 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 ALKBH2Q6NS38 261 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 C6orf89Q6UWU4 347 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 PRSS57Q6UWY2 283 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 LRRC74BQ6ZQY2 392 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 NUFIP2Q7Z417 695 aaKnown RBP9.26□□□□□ -0.93
NR1I3-222ENST00000506018 PEX5LQ8IYB4 626 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF440Q8IYI8 595 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 ZNF100Q8IYN0 542 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 GABRG1Q8N1C3 465 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 FAM71CQ8NEG0 241 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 WFDC11Q8NEX6 87 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 PIGXQ8TBF5 258 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 WDR60Q8WVS4 1066 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 S100PBPQ96BU1 408 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 DDIT4LQ96D03 193 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 SPDL1Q96EA4 605 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 PSD2Q9BQI7 771 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 POTEKPQ9BYX7 375 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 QRSL1Q9H0R6 528 aaKnown RBP9.26□□□□□ -0.93
NR1I3-222ENST00000506018 ARMC7Q9H6L4 198 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 MTHFD2LQ9H903 347 aaPredicted RBP9.26□□□□□ -0.93
NR1I3-222ENST00000506018 EFCAB1Q9HAE3 211 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 THUMPD1Q9NXG2 353 aaKnown RBP9.26□□□□□ -0.93
NR1I3-222ENST00000506018 ARMCX1Q9P291 453 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 P2RX2Q9UBL9 471 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 KCNE5Q9UJ90 142 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 PRDM4Q9UKN5 801 aa9.26□□□□□ -0.93
NR1I3-222ENST00000506018 LOC100653049A0A140TA62 436 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 A0A1W2PP18 115 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 SMAD9O15198 467 aaKnown RBP9.25□□□□□ -0.93
NR1I3-222ENST00000506018 KLF4O43474 513 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 GCM2O75603 506 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-222ENST00000506018 KRT34O76011 436 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 PMS2P2O95744 297 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 ADAP00813 363 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 NPPAP01160 153 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 THBDP07204 575 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 CD3EP07766 207 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 COX4I1P13073 169 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 NID1P14543 1247 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 OR3A2P47893 321 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 CRISP3P54108 245 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 MXRA7P84157 204 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 CHRNEQ04844 493 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 PDK3Q15120 406 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 MAPK14Q16539 360 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 ZSWIM7Q19AV6 140 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 Q6ZT83 130 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 BHLHA15Q7RTS1 189 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-222ENST00000506018 YTHDF3Q7Z739 585 aaKnown RBP9.25□□□□□ -0.93
NR1I3-222ENST00000506018 MUCL1Q96DR8 90 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 ITCHQ96J02 903 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 TEX37Q96LM6 180 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 BDH2Q9BUT1 245 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 RAD21L1Q9H4I0 556 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 CTPS2Q9NRF8 586 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 GID8Q9NWU2 228 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 LEF1Q9UJU2 399 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-222ENST00000506018 RNF115Q9Y4L5 304 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 PRR14LQ5THK1 2151 aa9.25□□□□□ -0.93
NR1I3-222ENST00000506018 CENPVL1A0A0U1RR11 272 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 CFAP73A6NFT4 308 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 AGAP5A6NIR3 686 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 NR5A2O00482 541 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 HS3ST1O14792 307 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 EIF1BO60739 113 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 GSNP06396 782 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 INHBBP09529 407 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 CRATP43155 626 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 IDH2P48735 452 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 POLR2HP52434 150 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 COPZ1P61923 177 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 FUT5Q11128 374 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 LARS2Q15031 903 aaKnown RBP9.24□□□□□ -0.93
NR1I3-222ENST00000506018 SYPL1Q16563 259 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 LIN52Q52LA3 116 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 OLIG3Q7RTU3 272 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 P2RY8Q86VZ1 359 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 SNX32Q86XE0 403 aa9.24□□□□□ -0.93
NR1I3-222ENST00000506018 UBE2J2Q8N2K1 259 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms