RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PTAR1Q7Z6K3 402 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 RBM23Q86U06 439 aaKnown RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 NKAIN4Q8IVV8 208 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CMTM1Q8IZ96 169 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 PELI3Q8N2H9 469 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 LIX1Q8N485 282 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 RAB42Q8N4Z0 105 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 RNF10Q8N5U6 811 aaKnown RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TPRX1Q8N7U7 411 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 C8orf31Q8N9H6 132 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ACOT4Q8N9L9 421 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TMEM178AQ8NBL3 297 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 OR7G1Q8NGA0 311 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 OR5B3Q8NH48 314 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 RFESDQ8TAC1 157 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 SLC7A13Q8TCU3 470 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TCTEX1D2Q8WW35 142 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 HPSE2Q8WWQ2 592 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 IL1F10Q8WWZ1 152 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 GTF2H4Q92759 462 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CD101Q93033 1021 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 C9orf72Q96LT7 481 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 OPALINQ96PE5 141 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 FAM173AQ9BQD7 235 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 OVOL2Q9BRP0 275 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ACTR3CQ9C0K3 210 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 REEP4Q9H6H4 257 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 RETNQ9HD89 108 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 SDHAF3Q9NRP4 125 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 THUMPD1Q9NXG2 353 aaKnown RBP3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 LNPEPQ9UIQ6 1025 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 KCNG2Q9UJ96 466 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 POFUT2Q9Y2G5 429 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 ADAMTS20P59510 1910 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 UBN2Q6ZU65 1347 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 CNTNAP2Q9UHC6 1331 aa3.12□□□□□ -1.91
HMGB1P22-201ENST00000505315 TAF1P21675 1872 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 A0A087X1B8 175 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 NSG1A0A0A6YYJ2 146 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 IGHV4-61A0A0C4DH41 118 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 TRBV7-9A0A0J9YWB2 115 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 PRSS37A4D1T9 235 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 TRABD2BA6NFA1 517 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 VSTM2BA6NLU5 285 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 TRDCB7Z8K6 153 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 PLPP1O14494 284 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 XRCC2O43543 280 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 MAGEC1O60732 1142 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 RAMP2O60895 175 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 FZD7O75084 574 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 PROP1O75360 226 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ATP5HO75947 161 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 C1QL1O75973 258 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 CLIC3O95833 236 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 IGHV4-59P01825 116 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 PIGRP01833 764 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 HLA-HP01893 362 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 FGGP02679 453 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 RPN2P04844 631 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ALDOBP05062 364 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 GPIP06744 558 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF853P0CG23 659 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 RD3LP0DJH9 198 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 IGHV4-38-2P0DP08 117 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF43P17038 809 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 SYT1P21579 422 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 HTR2CP28335 458 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 PCK1P35558 622 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 UGT2B10P36537 528 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 NSG1P42857 185 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 TSFMP43897 325 aaKnown RBP3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 XCR1P46094 333 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 HAAOP46952 286 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 POU3F4P49335 361 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 HMGCS2P54868 508 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ELLP55199 621 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 TMEM50BP56557 158 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 CLDN18P56856 261 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 RPL8P62917 257 aaKnown RBP3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 TUBA1BP68363 451 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 DGCR6Q14129 220 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 PIGHQ14442 188 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 GRB7Q14451 532 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 OXA1LQ15070 435 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 SRSF7Q16629 238 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 MOGAT2Q3SYC2 334 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 EIPR1Q53HC9 387 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ACER2Q5QJU3 275 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 C1orf220Q5T0J3 134 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 DCST2Q5T1A1 773 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 SLC25A47Q6Q0C1 308 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ZNF621Q6ZSS3 439 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 SH2D5Q6ZV89 423 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 PGAP1Q75T13 922 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 ARCQ7LC44 396 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 HDDC2Q7Z4H3 204 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 SLC7A5P1Q8MH63 180 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 OR2L13Q8N349 312 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 METTL4Q8N3J2 472 aa3.11□□□□□ -1.91
HMGB1P22-201ENST00000505315 C17orf78Q8N4C9 275 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms