RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 GPIP06744 558 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 STSP08842 583 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 RAP2AP10114 183 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 THRBP10828 461 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 UMPSP11172 480 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 RHCEP18577 417 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 YAP1P46937 504 aaKnown RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 UQCRFS1P47985 274 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ERFP50548 548 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 POLR2HP52434 150 aaKnown RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 MAP2K6P52564 334 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 UGT2B15P54855 530 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 SELENBP1Q13228 472 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 MRPL49Q13405 166 aaKnown RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 DGCR6Q14129 220 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 IGFBP7Q16270 282 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 C3AR1Q16581 482 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 GXYLT1Q4G148 440 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 SYT14P1Q58G82 188 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ALG10BQ5I7T1 473 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 C3orf33Q6P1S2 294 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ARHGAP11AQ6P4F7 1023 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ULK3Q6PHR2 472 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 PRICKLE2Q7Z3G6 844 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 SLC46A3Q7Z3Q1 461 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 WDFY1Q8IWB7 410 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 GHDCQ8N2G8 530 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 NAXEQ8NCW5 288 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ZPLD1Q8TCW7 415 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM255BQ8WV15 326 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 DNAJA4Q8WW22 397 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 PROX1Q92786 737 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 FAM162AQ96A26 154 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 KTI12Q96EK9 354 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF845Q96IR2 970 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 MOGAT1Q96PD6 335 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 TUBA1CQ9BQE3 449 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 PIGQQ9BRB3 760 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 CHID1Q9BWS9 393 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 SRXN1Q9BYN0 137 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ANKRD19PQ9H560 264 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 B3GAT1Q9P2W7 334 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 SEC14L4Q9UDX3 406 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 RIMS3Q9UJD0 308 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 SLC9A8Q9Y2E8 581 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 TMED7Q9Y3B3 224 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 AP4B1Q9Y6B7 739 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 V9GYQ6 96 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 FASNP49327 2511 aaKnown RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 PRR14LQ5THK1 2151 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 A0A1W2PNR3 127 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 SH3PXD2BA1X283 911 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 MBD3L4A6NDZ8 208 aaPredicted RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 MBD3L3A6NE82 208 aaPredicted RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 WIPF3A6NGB9 483 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 MBD3L5A6NJ08 208 aaPredicted RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 LIPT2A6NK58 231 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF716A6NP11 495 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 E9PQ18 207 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 H3BML4 177 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 CDC42EP2O14613 210 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 SMAD9O15198 467 aaKnown RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 GSTA4O15217 222 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 SLC19A2O60779 497 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 FKBP6O75344 327 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 TRAPPC6AO75865 159 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 TGM6O95932 706 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 BGLAPP02818 100 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 OPN1LWP04000 364 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 ASAH2BP0C7U1 165 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 RNF224P0DH78 156 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 TCEA1P23193 301 aaKnown RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 SLC7A1P30825 629 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 CA7P43166 264 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 HTR3AP46098 478 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 OMPP47874 163 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 CLK1P49759 484 aaKnown RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 CCR4P51679 360 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF41P51814 821 aaPredicted RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 AGFG1P52594 562 aaKnown RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 IST1P53990 364 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 CTBP2P56545 445 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 RPS4XP62701 263 aaKnown RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 PLGLB1Q02325 96 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 MERTKQ12866 999 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 PPP1R8Q12972 351 aaKnown RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 MYBPHQ13203 477 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 CDSNQ15517 529 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 RAET1LQ5VY80 246 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 TBPL2Q6SJ96 375 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 DEF8Q6ZN54 512 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 TMPPEQ6ZT21 453 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 ESPNLQ6ZVH7 1005 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 ZER1Q7Z7L7 766 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 RANBP3LQ86VV4 465 aaPredicted RBP4.42□□□□□ -1.7
LMNB1-208ENST00000504788 EPHX4Q8IUS5 362 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 P3H2Q8IVL5 708 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 ZDHHC21Q8IVQ6 265 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 TMCO5AQ8N6Q1 288 aa4.42□□□□□ -1.7
LMNB1-208ENST00000504788 OR6S1Q8NH40 331 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms