RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GSTM3P21266 225 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 ITPKBP27987 946 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 ELK4P28324 431 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 IFNA8P32881 189 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 IFNGR2P38484 337 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 CYB561P49447 251 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 POLR2HP52434 150 aaKnown RBP9.4□□□□□ -0.9
TPM3-217ENST00000504663 CHN2P52757 468 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 B3GALT5-AS1P59052 145 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 COPZ1P61923 177 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 CRYZQ08257 329 aaKnown RBP9.4□□□□□ -0.9
TPM3-217ENST00000504663 MFAP5Q13361 173 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 APOFQ13790 326 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 SLC22A10Q63ZE4 541 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 TIGD3Q6B0B8 471 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 SPINK14Q6IE38 97 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 THAP5Q7Z6K1 395 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 LRRC17Q8N6Y2 441 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 LRRC75AQ8NAA5 344 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 CLEC1AQ8NC01 280 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 ZNF248Q8NDW4 579 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 ZNF563Q8TA94 476 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 TAAR8Q969N4 342 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 SCMH1Q96GD3 660 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 OR52D1Q9H346 318 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 Q9H521 79 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 ZNF696Q9H7X3 374 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 PNPLA3Q9NST1 481 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 TUBA8Q9NY65 449 aaPredicted RBP9.4□□□□□ -0.9
TPM3-217ENST00000504663 GPR83Q9NYM4 423 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 PLA2G3Q9NZ20 509 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 STMN3Q9NZ72 180 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 RPS6KB2Q9UBS0 482 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 POLHQ9Y253 713 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 TMEM5Q9Y2B1 443 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 TMED7Q9Y3B3 224 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 PCDHGB6Q9Y5F9 930 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 ORC6Q9Y5N6 252 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 CSAG2Q9Y5P2 127 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 GMPPBQ9Y5P6 360 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 HSPE1-MOB4S4R3N1 261 aa9.4□□□□□ -0.9
TPM3-217ENST00000504663 MED12Q93074 2177 aa9.4□□□□□ -0.91
TPM3-217ENST00000504663 FREM3P0C091 2139 aa9.4□□□□□ -0.91
TPM3-217ENST00000504663 TRAV27A0A087WT01 109 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ELOA3DA6NLF2 546 aaPredicted RBP9.39□□□□□ -0.91
TPM3-217ENST00000504663 TRIM64CA6NLI5 447 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 EFCAB9A8MZ26 197 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 CDK2AP1O14519 115 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SUSD5O60279 629 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ZIC3O60481 467 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 RPSAP08865 295 aaKnown RBP9.39□□□□□ -0.91
TPM3-217ENST00000504663 RFPL3SP0C7P2 107 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ASAH2BP0C7U1 165 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SHC1P29353 583 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 UQCRC1P31930 480 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 RRADP55042 308 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 NUP107P57740 925 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 C19orf57Q0VDD7 668 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 CDK5R2Q13319 367 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 OR1C1Q15619 314 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ELOA3BQ3SY89 546 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 GXYLT1Q4G148 440 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ABHD17BQ5VST6 288 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 BROXQ5VW32 411 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 TTC33Q6PID6 262 aaPredicted RBP9.39□□□□□ -0.91
TPM3-217ENST00000504663 LINC00696Q6ZRV3 163 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 C8orf59Q8N0T1 100 aaPredicted RBP9.39□□□□□ -0.91
TPM3-217ENST00000504663 GTPBP8Q8N3Z3 284 aaPredicted RBP9.39□□□□□ -0.91
TPM3-217ENST00000504663 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 FDCSPQ8NFU4 85 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ELOA3Q8NG57 546 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 RHOXF1Q8NHV9 184 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 CNIH3Q8TBE1 160 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SGCDQ92629 289 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ZNF566Q969W8 418 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SGTBQ96EQ0 304 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 MRGPRX4Q96LA9 322 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SAMD8Q96LT4 415 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SIGLEC11Q96RL6 698 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 OR11A1Q9GZK7 315 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ZNF556Q9HAH1 456 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SDHAF3Q9NRP4 125 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SACM1LQ9NTJ5 587 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 PAK1IP1Q9NWT1 392 aaPredicted RBP9.39□□□□□ -0.91
TPM3-217ENST00000504663 SELENONQ9NZV5 590 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 LRFN1Q9P244 771 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 SEC14L4Q9UDX3 406 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 VDAC3Q9Y277 283 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 KCNMB2Q9Y691 235 aa9.39□□□□□ -0.91
TPM3-217ENST00000504663 ANKRD11Q6UB99 2663 aaPredicted RBP9.39□□□□□ -0.91
TPM3-217ENST00000504663 IGF2RP11717 2491 aa9.38□□□□□ -0.91
TPM3-217ENST00000504663 TRAV36DV7A0A075B6V5 113 aa9.38□□□□□ -0.91
TPM3-217ENST00000504663 OR5H15A6NDH6 313 aa9.38□□□□□ -0.91
TPM3-217ENST00000504663 EIF4E1BA6NMX2 242 aaKnown RBP9.38□□□□□ -0.91
TPM3-217ENST00000504663 KLK10O43240 276 aa9.38□□□□□ -0.91
TPM3-217ENST00000504663 ZNF208O43345 1280 aa9.38□□□□□ -0.91
TPM3-217ENST00000504663 PRKYO43930 277 aa9.38□□□□□ -0.91
TPM3-217ENST00000504663 NME2P1O60361 137 aa9.38□□□□□ -0.91
TPM3-217ENST00000504663 SLC25A12O75746 678 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms