RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TMEM52BQ4KMG9 183 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 Q6ZPB1 254 aaPredicted RBP15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 MISPQ8IVT2 679 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 SENP5Q96HI0 755 aaPredicted RBP15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 ASIC5Q9NY37 505 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 STRCQ7RTU9 1775 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 F8W036 122 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 ACOT8O14734 319 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 CTHP32929 405 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 ATP1B3P54709 279 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 BLOC1S1P78537 153 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 ZP2Q05996 745 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 PLK5Q496M5 336 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 OR7E24Q6IFN5 339 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 C12orf45Q8N5I9 185 aaPredicted RBP15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 IL17RDQ8NFM7 739 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 OR5L1Q8NGL2 311 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 ZBTB8AQ96BR9 441 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 KDM4EB2RXH2 506 aaPredicted RBP15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 AQP9O43315 295 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 MT-ND4P03905 459 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 TFAP2AP05549 437 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 GABRR1P24046 479 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 TSFMP43897 325 aaKnown RBP15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 TANGO2Q6ICL3 276 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 LMNTD1Q8N9Z9 388 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 NXF5Q9H1B4 397 aaKnown RBP15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 CXorf36Q9H7Y0 433 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 CDC14CA4D256 554 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 MEIS3P1A6NDR6 274 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 SERINC4A6NH21 518 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 MT-CO2P00403 227 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 OR2T7P0C7T2 308 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 OR1D4P47884 311 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 CX3CR1P49238 355 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 SPOCK1Q08629 439 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC22A6Q4U2R8 563 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 OR9K2Q8NGE7 335 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 OR2T27Q8NH04 317 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 TM4SF18Q96CE8 201 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 OR2M2Q96R28 347 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 ULBP2Q9BZM5 246 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 TMEM38AQ9H6F2 299 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 B4DXG7 233 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 ARHGAP33O14559 1287 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 CTDSP2O14595 271 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 TAPBPO15533 448 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 F13BP05160 661 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 PRKAR1BP31321 381 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC1A3P43003 542 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 EFNA3P52797 238 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 CDKN3Q16667 212 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 SULF2Q8IWU5 870 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 ZFAND1Q8TCF1 268 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 A0A1B0GV50 99 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 IFNA4P05014 189 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 EPHA1P21709 976 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 BDKRB2P30411 391 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 EEF1A2Q05639 463 aaKnown RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 BCL2A1Q16548 175 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 VRK3Q8IV63 474 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 VN1R2Q8NFZ6 395 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC41A2Q96JW4 573 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 CCNL2Q96S94 520 aaPredicted RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 PAPOLGQ9BWT3 736 aaKnown RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 SCG5P05408 212 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 TPT1P13693 172 aaKnown RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 SLC5A2P31639 672 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 MBTPS1Q14703 1052 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 MPEG1Q2M385 716 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 KRBOX4Q5JUW0 171 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 GLB1L2Q8IW92 636 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 MRPL41Q8IXM3 137 aaKnown RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 MKXQ8IYA7 352 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 LINC01465Q8N7H1 131 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 OR56B2PQ8NGI1 322 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 THAP10Q9P2Z0 257 aaPredicted RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 BCAT2O15382 392 aaPredicted RBP15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 LPAL2Q16609 132 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 NXNL2Q5VZ03 156 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 CHTF18Q8WVB6 975 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 AMDHD1Q96NU7 426 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 KATNB1Q9BVA0 655 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 OLAHQ9NV23 265 aa15.38■□□□□ 0.05
PCDHA1-203ENST00000504120 TMEM212A6NML5 194 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ETV6P41212 452 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 RPP30P78346 268 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 LTB4RQ15722 352 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 PLCXD3Q63HM9 321 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 CYP4V2Q6ZWL3 525 aaPredicted RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ZNF582Q96NG8 517 aaPredicted RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 LRFN1Q9P244 771 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 SUSD5O60279 629 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 EIF2DP41214 584 aaKnown RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 LUMP51884 338 aaPredicted RBP15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 PFN3P60673 137 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 OR6F1Q8NGZ6 308 aa15.37■□□□□ 0.05
PCDHA1-203ENST00000504120 ARL5BQ96KC2 179 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms